Data from: Transcriptome and proteome dynamics of a light-dark synchronized bacterial cell cycle

 

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Title Proteome_t0
Downloaded 79 times
Description Protein-level quantitative proteomics data (protXML format) of the diel proteome of Prochlorococcus MED4 for timepoint 0 hours. Includes peptide-spectrum matches generated by X!Tandem, OMSSA and Myrimatch (and combined with iProphet), and 15N-labeling-based quantifications performed with ASAPratio.
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Title Proteome_t2
Downloaded 47 times
Description Protein-level quantitative proteomics data (protXML format) of the diel proteome of Prochlorococcus MED4 for timepoint 2 hours. Includes peptide-spectrum matches generated by X!Tandem, OMSSA and Myrimatch (and combined with iProphet), and 15N-labeling-based quantifications performed with ASAPratio.
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Title Proteome_t4
Downloaded 45 times
Description Protein-level quantitative proteomics data (protXML format) of the diel proteome of Prochlorococcus MED4 for timepoint 4 hours. Includes peptide-spectrum matches generated by X!Tandem, OMSSA and Myrimatch (and combined with iProphet), and 15N-labeling-based quantifications performed with ASAPratio.
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Title Proteome_t6
Downloaded 36 times
Description Protein-level quantitative proteomics data (protXML format) of the diel proteome of Prochlorococcus MED4 for timepoint 6 hours. Includes peptide-spectrum matches generated by X!Tandem, OMSSA and Myrimatch (and combined with iProphet), and 15N-labeling-based quantifications performed with ASAPratio.
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Title Proteome_t8
Downloaded 38 times
Description Protein-level quantitative proteomics data (protXML format) of the diel proteome of Prochlorococcus MED4 for timepoint 8 hours. Includes peptide-spectrum matches generated by X!Tandem, OMSSA and Myrimatch (and combined with iProphet), and 15N-labeling-based quantifications performed with ASAPratio.
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Title Proteome_t10
Downloaded 26 times
Description Protein-level quantitative proteomics data (protXML format) of the diel proteome of Prochlorococcus MED4 for timepoint 10 hours. Includes peptide-spectrum matches generated by X!Tandem, OMSSA and Myrimatch (and combined with iProphet), and 15N-labeling-based quantifications performed with ASAPratio.
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Title Proteome_t12
Downloaded 39 times
Description Protein-level quantitative proteomics data (protXML format) of the diel proteome of Prochlorococcus MED4 for timepoint 12 hours. Includes peptide-spectrum matches generated by X!Tandem, OMSSA and Myrimatch (and combined with iProphet), and 15N-labeling-based quantifications performed with ASAPratio.
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Title Proteome_t14
Downloaded 35 times
Description Protein-level quantitative proteomics data (protXML format) of the diel proteome of Prochlorococcus MED4 for timepoint 14 hours. Includes peptide-spectrum matches generated by X!Tandem, OMSSA and Myrimatch (and combined with iProphet), and 15N-labeling-based quantifications performed with ASAPratio.
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Title Proteome_t16
Downloaded 30 times
Description Protein-level quantitative proteomics data (protXML format) of the diel proteome of Prochlorococcus MED4 for timepoint 16 hours. Includes peptide-spectrum matches generated by X!Tandem, OMSSA and Myrimatch (and combined with iProphet), and 15N-labeling-based quantifications performed with ASAPratio.
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Title Proteome_t18
Downloaded 37 times
Description Protein-level quantitative proteomics data (protXML format) of the diel proteome of Prochlorococcus MED4 for timepoint 18 hours. Includes peptide-spectrum matches generated by X!Tandem, OMSSA and Myrimatch (and combined with iProphet), and 15N-labeling-based quantifications performed with ASAPratio.
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Title Proteome_t20
Downloaded 33 times
Description Protein-level quantitative proteomics data (protXML format) of the diel proteome of Prochlorococcus MED4 for timepoint 20 hours. Includes peptide-spectrum matches generated by X!Tandem, OMSSA and Myrimatch (and combined with iProphet), and 15N-labeling-based quantifications performed with ASAPratio.
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Title Proteome_t22
Downloaded 40 times
Description Protein-level quantitative proteomics data (protXML format) of the diel proteome of Prochlorococcus MED4 for timepoint 22 hours. Includes peptide-spectrum matches generated by X!Tandem, OMSSA and Myrimatch (and combined with iProphet), and 15N-labeling-based quantifications performed with ASAPratio.
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Title Proteome_t24
Downloaded 25 times
Description Protein-level quantitative proteomics data (protXML format) of the diel proteome of Prochlorococcus MED4 for timepoint 24 hours. Includes peptide-spectrum matches generated by X!Tandem, OMSSA and Myrimatch (and combined with iProphet), and 15N-labeling-based quantifications performed with ASAPratio.
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Title Proteome_t26
Downloaded 33 times
Description Protein-level quantitative proteomics data (protXML format) of the diel proteome of Prochlorococcus MED4 for timepoint 26 hours. Includes peptide-spectrum matches generated by X!Tandem, OMSSA and Myrimatch (and combined with iProphet), and 15N-labeling-based quantifications performed with ASAPratio.
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Title RNAseq_t0
Downloaded 27 times
Description RNA-sequencing transcriptomics data of the diel cell cycle of Prochlorococcus MED4 for timepoint 0 hours. The compressed tar archive includes a Maq mapping file and pileup alignment.
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Title RNAseq_t2
Downloaded 14 times
Description RNA-sequencing transcriptomics data of the diel cell cycle of Prochlorococcus MED4 for timepoint 2 hours. The compressed tar archive includes a Maq mapping file and pileup alignment.
Download t2_RNAseq.tgz (105.6 Mb)
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Title RNAseq_t4
Downloaded 17 times
Description RNA-sequencing transcriptomics data of the diel cell cycle of Prochlorococcus MED4 for timepoint 4 hours. The compressed tar archive includes a Maq mapping file and pileup alignment.
Download t4_RNAseq.tgz (111.0 Mb)
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Title RNAseq_t6
Downloaded 17 times
Description RNA-sequencing transcriptomics data of the diel cell cycle of Prochlorococcus MED4 for timepoint 6 hours. The compressed tar archive includes a Maq mapping file and pileup alignment.
Download t6_RNAseq.tgz (95.14 Mb)
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Title RNAseq_t8
Downloaded 16 times
Description RNA-sequencing transcriptomics data of the diel cell cycle of Prochlorococcus MED4 for timepoint 8 hours. The compressed tar archive includes a Maq mapping file and pileup alignment.
Download t8_RNAseq.tgz (109.9 Mb)
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Title RNAseq_t10
Downloaded 15 times
Description RNA-sequencing transcriptomics data of the diel cell cycle of Prochlorococcus MED4 for timepoint 10 hours. The compressed tar archive includes a Maq mapping file and pileup alignment.
Download t10_RNAseq.tgz (101.3 Mb)
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Title RNAseq_t12
Downloaded 13 times
Description RNA-sequencing transcriptomics data of the diel cell cycle of Prochlorococcus MED4 for timepoint 12 hours. The compressed tar archive includes a Maq mapping file and pileup alignment.
Download t12_RNAseq.tgz (115.8 Mb)
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Title RNAseq_t14
Downloaded 19 times
Description RNA-sequencing transcriptomics data of the diel cell cycle of Prochlorococcus MED4 for timepoint 14 hours. The compressed tar archive includes a Maq mapping file and pileup alignment.
Download t14_RNAseq.tgz (99.64 Mb)
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Title RNAseq_t16
Downloaded 12 times
Description RNA-sequencing transcriptomics data of the diel cell cycle of Prochlorococcus MED4 for timepoint 16 hours. The compressed tar archive includes a Maq mapping file and pileup alignment.
Download t16_RNAseq.tgz (78.12 Mb)
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Title RNAseq_t18
Downloaded 17 times
Description RNA-sequencing transcriptomics data of the diel cell cycle of Prochlorococcus MED4 for timepoint 18 hours. The compressed tar archive includes a Maq mapping file and pileup alignment.
Download t18_RNAseq.tgz (69.61 Mb)
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Title RNAseq_t20
Downloaded 19 times
Description RNA-sequencing transcriptomics data of the diel cell cycle of Prochlorococcus MED4 for timepoint 20 hours. The compressed tar archive includes a Maq mapping file and pileup alignment.
Download t20_RNAseq.tgz (97.33 Mb)
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Title RNAseq_t22
Downloaded 15 times
Description RNA-sequencing transcriptomics data of the diel cell cycle of Prochlorococcus MED4 for timepoint 22 hours. The compressed tar archive includes a Maq mapping file and pileup alignment.
Download t22_RNAseq.tgz (104.6 Mb)
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Title RNAseq_t24
Downloaded 14 times
Description RNA-sequencing transcriptomics data of the diel cell cycle of Prochlorococcus MED4 for timepoint 24 hours. The compressed tar archive includes a Maq mapping file and pileup alignment.
Download t24_RNAseq.tgz (89.32 Mb)
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Title RNAseq_t26
Downloaded 14 times
Description RNA-sequencing transcriptomics data of the diel cell cycle of Prochlorococcus MED4 for timepoint 26 hours. The compressed tar archive includes a Maq mapping file and pileup alignment.
Download t26_RNAseq.tgz (100.6 Mb)
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When using this data, please cite the original publication:

Waldbauer JR, Rodrigue S, Coleman ML, Chisholm SW (2012) Transcriptome and proteome dynamics of a light-dark synchronized bacterial cell cycle. PLoS ONE 7(8): e43432. http://dx.doi.org/10.1371/journal.pone.0043432

Additionally, please cite the Dryad data package:

Waldbauer JR, Rodrigue S, Coleman ML, Chisholm SW (2012) Data from: Transcriptome and proteome dynamics of a light-dark synchronized bacterial cell cycle. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.8kk12
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