Data from: Exploring phylogenetic relationships within Myriapoda and the effects of matrix composition and occupancy on phylogenomic reconstruction

Fernández R, Edgecombe GD, Giribet G

Date Published: July 12, 2016

DOI: http://dx.doi.org/10.5061/dryad.8mp17.2

 

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Title Figure S1
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Description Figure S1. Phylogenetic hypothesis of the interrelationships of Pauropoda, Symphyla, Diplopoda and Chilopoda inferred from a 4-gene data set using ExaBayes.
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Title Figure S2
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Description Figure S2. Phylogenetic informativeness profile of the genes included in supermatrices III (a), VI (b) and V (c) during the interval of time corresponding to the diversification of all myriapod clades (as delimited by blue lines in the ultrametric tree in (a)).
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Title Figure S3
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Description Figure S3. Phylogenetic hypothesis of Myriapoda based on 232 morphological characters coded for both extant and extinct species (see Material and Methods for further details). Strict consensus of 2515 shortest cladograms (420 steps). Fossil taxa are marked with a dagger symbol.
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Title Figure S4
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Description Figure S4. Topologies recovered in the SAW analyses to test for LBA between a) Symphyla and Polyxenida, and b) Scutigeromorpha and Craterostigmomorpha.
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Title Figure S5
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Description Figure S5. BaCoCa results showing compositional homogeneity values per taxon and per gene in supermatrices II and III (results in supermatrix I not shown due to a lack of resolution related to the high number of genes included in the matrix).
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Title Figure S6
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Description Figure S6. Supernetwork representation of quartets derived from individual ML gene trees, for the genes concatenated in supermatrices I (a), II (b) and III (c). Phylogenetic conflict is represented by reticulations and short branches.
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Title Sources of codings and dates for fossils and supplementary references
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Download Supplementary_Fossil codings.pdf (95.76 Kb)
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When using this data, please cite the original publication:

Fernandez R, Edgecombe GD, Giribet G (2016) Exploring phylogenetic relationships within Myriapoda and the effects of matrix composition and occupancy on phylogenomic reconstruction. Systematic Biology 65 (5): 871-889. http://dx.doi.org/10.1093/sysbio/syw041

Additionally, please cite the Dryad data package:

Fernández R, Edgecombe GD, Giribet G (2016) Data from: Exploring phylogenetic relationships within Myriapoda and the effects of matrix composition and occupancy on phylogenomic reconstruction. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.8mp17.2
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