Data from: Genomic divergence across ecological gradients in the Central African rainforest songbird (Andropadus virens)

Zhen Y, Harrigan RJ, Ruegg KC, Anderson EC, Ng TC, Lao S, Lohmueller KE, Smith TB

Date Published: July 27, 2017

DOI: http://dx.doi.org/10.5061/dryad.8n8t0

 

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Title fasta consensus sequences of RAD loci
Downloaded 6 times
Description 35,152 fasta sequences of final RAD loci assembled from our dataset. Filters are described in the methods and summarized in supplemental Table S2.
Download RADtag_consensus_sequence.fa.gz (914.0 Kb)
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Title VCF file containing bi-allelic SNPs
Downloaded 1 time
Description VCF file contains 255,290 bi-allelic SNPs identified from RADseq data from 182 samples using stacks pipeline. SNPs are not filtered by minor allele frequency.
Download greenbul.vcf.gz (49.56 Mb)
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Title Sample information
Downloaded 3 times
Description population and habitat information of samples.
Download Sample_Info.txt (4.414 Kb)
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When using this data, please cite the original publication:

Zhen Y, Harrigan RJ, Ruegg KC, Anderson EC, Ng TC, Lao S, Lohmueller KE, Smith TB (2017) Genomic divergence across ecological gradients in the Central African rainforest songbird (Andropadus virens). Molecular Ecology, online in advance of print. http://dx.doi.org/10.1111/mec.14270

Additionally, please cite the Dryad data package:

Zhen Y, Harrigan RJ, Ruegg KC, Anderson EC, Ng TC, Lao S, Lohmueller KE, Smith TB (2017) Data from: Genomic divergence across ecological gradients in the Central African rainforest songbird (Andropadus virens). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.8n8t0
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