Data from: Comparative study of the validity of three regions of 18S-rRNA gene for massively parallel sequencing-based monitoring of the planktonic eukaryote community

Tanabe AS, Nagai S, Hida K, Yasuike M, Fujiwara A, Nakamura Y, Takano Y, Katakura S

Date Published: August 24, 2015

DOI: http://dx.doi.org/10.5061/dryad.8pd11

 

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Title EnvironmentalSurvey.tar.gz
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Description Analysis commands and results of environmental surveys by 454 massively parallel 18S amplicon sequencing of eukaryote community sampled at Monbetsu.
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Title EstimationOfPCRSuccessRates.tar.gz
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Description Analysis commands and results for estimating PCR success rates and amplicon sequence variability.
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Title EstimationOfEffectiveNumberOfSequences.tar.gz
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Description Analysis commands and results of estimation of effective number of registered sequences.
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When using this data, please cite the original publication:

Tanabe AS, Nagai S, Hida K, Yasuike M, Fujiwara A, Nakamura Y, Takano Y, Katakura S (2015) Comparative study of the validity of three regions of 18S-rRNA gene for massively parallel sequencing-based monitoring of the planktonic eukaryote community. Molecular Ecology Resources 16(2): 402-414. http://dx.doi.org/10.1111/1755-0998.12459

Additionally, please cite the Dryad data package:

Tanabe AS, Nagai S, Hida K, Yasuike M, Fujiwara A, Nakamura Y, Takano Y, Katakura S (2015) Data from: Comparative study of the validity of three regions of 18S-rRNA gene for massively parallel sequencing-based monitoring of the planktonic eukaryote community. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.8pd11
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