Data from: Quantifying sequence proportions in a DNA-based diet study using Ion Torrent amplicon sequencing: which counts count?

 

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Title Ion Torrent diet data
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Description FASTQ sequence files and additional data described in the ReadMe file
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Title 1 MER paper functions
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Description Functions needed to run R code
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Title 2 MER R code database
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Description R code
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Title 3 MER R code summary
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Description R code
Download 3 MER R code summary.r (16.42 Kb)
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When using this data, please cite the original publication:

Deagle BE, Thomas AC, Shaffer AK, Trites AW, Jarman SN (2013) Quantifying sequence proportions in a DNA-based diet study using Ion Torrent amplicon sequencing: which counts count? Molecular Ecology Resources 13(4): 620–633. http://dx.doi.org/10.1111/1755-0998.12103

Additionally, please cite the Dryad data package:

Deagle BE, Thomas AC, Shaffer AK, Trites AW, Jarman SN (2013) Data from: Quantifying sequence proportions in a DNA-based diet study using Ion Torrent amplicon sequencing: which counts count? Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.953hv
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