Data from: Novel molecular approach demonstrates turbid river plumes reduce predation mortality on larval fish

Carreon-Martinez LB, Wellband KW, Johnson TB, Ludsin SA, Heath DD

Date Published: September 17, 2014

DOI: http://dx.doi.org/10.5061/dryad.9b495

 

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Title Yellow Perch predation data
Downloaded 10 times
Description Presence/absence and number of Yellow Perch (YP) detected in predator fish stomachs from the western basin of Lake Erie. Data generated using SNP and microsatellite analyses respectively. Site: D = Detroit River plume, M = Maumee River plume; pred: Predator species, WA = walleye, WB = White Bass, WP = White Perch; yp: presence (1) or absence (0) of YP in predator stomachs as detected with SNP assay; YP##bands: the number of YP sized microsatellite bands detected in stomach content DNA for locus ##; YP##fish: the number of larval YP inferred from the number of microsatellite bands for microsatellite ## and the allele accumulation curve (see Supplemental Figure 1); Avefish: the average number of larval YP detected in stomach content DNA based on all 5 microsatellite loci.
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Title YP_SNP_Validation_Non-target_Ct_values
Downloaded 36 times
Description Data generated during qPCR validation of Yellow Perch SNP assay. Column headings: DNA concentration (ng/uL): final concentration of DNA in ng/uL added to validation assays; WA Ct: Cycle number at which Walleye DNA reached the amplification threshold when amplified with the Yellow Perch specific SNP assay; WB Ct: Cycle number at which White Bass DNA reached the amplification threshold when amplified with the Yellow Perch specific SNP assay; WP Ct: Cycle number at which White Perch DNA reached the amplification threshold when amplified with the Yellow Perch specific SNP assay; mean Ct: Average of all non-target predator Ct values when amplified with the Yellow Perch specific SNP assay; SD Ct: Standard Deviation of all non-target predator Ct values when amplified with the Yellow Perch specific SNP assay; SE Ct: Standard Error of all non-target predator Ct values when amplified with the Yellow Perch specific SNP assay
Download YP_SNP_Validation_Non-target_Ct_values.xls (22.01 Kb)
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Title BasinwidePredationEstimates
Downloaded 41 times
Description Description of calculations of basin wide Yellow Perch predation mortality estimates.
Download BasinwidePredationEstimates.docx (119.2 Kb)
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When using this data, please cite the original publication:

Carreon-Martinez LB, Wellband KW, Johnson TB, Ludsin SA, Heath DD (2014) Novel molecular approach demonstrates turbid river plumes reduce predation mortality on larval fish. Molecular Ecology 23(21): 5366-5377. http://dx.doi.org/10.1111/mec.12927

Additionally, please cite the Dryad data package:

Carreon-Martinez LB, Wellband KW, Johnson TB, Ludsin SA, Heath DD (2014) Data from: Novel molecular approach demonstrates turbid river plumes reduce predation mortality on larval fish. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.9b495
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