Data from: Genetic uniformity and long-distance clonal dispersal in the invasive androgenetic Corbicula clams

Pigneur L, Etoundi E, Aldridge DC, Marescaux J, Yasuda N, Van Doninck K

Date Published: September 11, 2014

DOI: http://dx.doi.org/10.5061/dryad.9cn66

 

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Title Corbicula spp. COI sequences alignment file.
Downloaded 13 times
Description Fasta file containing alignment of COI sequences (545 bp fragment) from Corbicula spp. The alignment was generated via BioEdit 7.0.5.3.
Download Pigneur_et_al_COI_aligned.fasta (34.87 Kb)
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Title Source file for DAPC.
Downloaded 11 times
Description Genepop file for DAPC using adegenet and R. Genetic data from 10 microsatellite loci in Corbicula spp..
Download Corbi_dapc_noZA.gen (29.39 Kb)
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Title Code lines for DAPC on Corbicula spp. genetic dataset.
Downloaded 31 times
Description Code lines for DAPC using package adegenet and R. The codelines include the find.clusters, the DAPC and the graphics commands.
Download CodelinesDAPC.txt (2.613 Kb)
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Title Bayesian Inference Corbicula spp..
Downloaded 2 times
Description Tree file corresponding to result of the Bayesian inference reported in Figure 2.
Download treeFile.nex (3.995 Kb)
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Title Maximum Likelihood Corbicula spp. .
Downloaded 1 time
Description Tree file corresponding to result of the Maximum Likelihood phylogeny reported in Figure 2.
Download TreeFileML.txt (2.245 Kb)
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When using this data, please cite the original publication:

Pigneur L, Etoundi E, Aldridge DC, Marescaux J, Yasuda N, Van Doninck K (2014) Genetic uniformity and long-distance clonal dispersal in the invasive androgenetic Corbicula clams. Molecular Ecology 23(20): 5102-5116. http://dx.doi.org/10.1111/mec.12912

Additionally, please cite the Dryad data package:

Pigneur L, Etoundi E, Aldridge DC, Marescaux J, Yasuda N, Van Doninck K (2014) Data from: Genetic uniformity and long-distance clonal dispersal in the invasive androgenetic Corbicula clams. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.9cn66
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