Data from: Mixture models of nucleotide sequence evolution that account for heterogeneity in the substitution process across sites and across lineages

Jayaswal V, Wong TKF, Robinson J, Poladian L, Jermiin LS

Date Published: June 11, 2014

DOI: http://dx.doi.org/10.5061/dryad.9h6h8

 

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Title Supplementary_material.tar.bz2
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Description This supplementary material contains three files: 1 - a README file, with further details about the other two files. 2 - Rokas_2.phy (an alignment of a data set used to illustrate the methods). 3 - Yeast_tree.nwk (the corresponding tree used to illustrate the methods).
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Title HAL-HAS Software
Description HAL-HAS is a program package, comprising HAL-BU, HAL-TD, and HAS, that was written to allow users to infer an optimal model of evolution for a given data set, a given tree.
Download //www.csiro.au/bioinformatics/software/HAL-HAS (0 bytes)
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Title Hetero Software
Description Hetero was written to facilitate the development and testing of phylogenetic methods.
Download //www.csiro.au/bioinformatics/software/Hetero (0 bytes)
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When using this data, please cite the original publication:

Jayaswal V, Wong TKF, Robinson J, Poladian L, Jermiin LS (2014) Mixture models of nucleotide sequence evolution that account for heterogeneity in the substitution process across sites and across lineages. Systematic Biology 63(5): 726-742. http://dx.doi.org/10.1093/sysbio/syu036

Additionally, please cite the Dryad data package:

Jayaswal V, Wong TKF, Robinson J, Poladian L, Jermiin LS (2014) Data from: Mixture models of nucleotide sequence evolution that account for heterogeneity in the substitution process across sites and across lineages. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.9h6h8
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