Data from: BrAD-seq: Breath Adapter Directional sequencing: a streamlined, ultra-simple and fast library preparation protocol for strand specific mRNA library construction

Townsley BT, Covington MF, Ichihashi Y, Zumstein K, Sinha NR

Date Published: May 15, 2015

DOI: http://dx.doi.org/10.5061/dryad.9mq14

 

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title SHO.FQ.tar.gz
Downloaded 6 times
Description Compressed file containing Tomato RNA-seq reads from BrAD-seq shotgun (SHO) type strand-specific libraries (SHO_22.fastq, SHO_23.fastq, SHO_24.fastq).
Download SHO.FQ.tar.gz (258.4 Mb)
Details View File Details
Title S_HTR.FQ.tar.gz
Downloaded 3 times
Description Compressed file containing Tomato SAM RNA-seq reads from HTR-method libraries (S_HTR_A5.fastq, S_HTR_A6.fastq, S_HTR_B6.fastq, S_HTR_B7.fastq)
Download S_HTR.FQ.tar.gz (238.5 Mb)
Details View File Details
Title L_HTR.FQ.tar.gz
Downloaded 4 times
Description Compressed file containing Tomato leaf RNA-seq reads from HTR-method libraries (L_HTR_A4.fastq, L_HTR_B5.fastq, L_HTR_C6.fastq, L_HTR_D7.fastq)
Download L_HTR.FQ.tar.gz (265.8 Mb)
Details View File Details
Title L_DGE.FQ2.tar.gz
Downloaded 7 times
Description Compressed file containing Tomato leaf RNA-seq reads from BrAd-seq DGE libraries (L_DGE_E7.fastq, L_DGE_E8.fastq, L_DGE_F1.fastq)
Download L_DGE.FQ2.tar.gz (711.6 Mb)
Details View File Details
Title S_DGE.FQ1.tar.gz
Downloaded 3 times
Description Compressed file containing Tomato SAM RNA-seq reads from BrAd-seq DGE libraries (S_DGE_A5.fastq, S_DGE_A6.fastq, S_DGE_B7.fastq, S_DGE_C7.fastq)
Download S_DGE.FQ1.tar.gz (945.4 Mb)
Details View File Details
Title L_DGE.FQ1.tar.gz
Downloaded 4 times
Description Compressed file containing Tomato leaf RNA-seq reads from BrAd-seq DGE libraries (L_DGE_B5.fastq, L_DGE_C6.fastq, L_DGE_D7.fastq)
Download L_DGE.FQ1.tar.gz (719.1 Mb)
Details View File Details
Title S_DGE.FQ2.tar.gz
Downloaded 6 times
Description Compressed file containing Tomato SAM RNA-seq reads from BrAd-seq DGE libraries (S_DGE_D8.fastq, S_DGE_E1.fastq, S_DGE_F2.fastq)
Download S_DGE.FQ2.tar.gz (781.1 Mb)
Details View File Details
Title README
Downloaded 9 times
Description Links to detailed information regarding (1) sample and library preparation and (2) bioinformatic methods
Download README.txt (547 bytes)
Details View File Details

When using this data, please cite the original publication:

Townsley BT, Covington MF, Ichihashi Y, Zumstein K, Sinha NR (2015) BrAD-seq: Breath Adapter Directional sequencing: a streamlined, ultra-simple and fast library preparation protocol for strand specific mRNA library construction. Frontiers in Plant Science 6: 366. http://dx.doi.org/10.3389/fpls.2015.00366

Additionally, please cite the Dryad data package:

Townsley BT, Covington MF, Ichihashi Y, Zumstein K, Sinha NR (2015) Data from: BrAD-seq: Breath Adapter Directional sequencing: a streamlined, ultra-simple and fast library preparation protocol for strand specific mRNA library construction. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.9mq14
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: