Data from: Are habitat fragmentation, local adaptation and isolation by distance driving population divergence in wild rice Oryza rufipogon?

 

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Title microsatellites data for genepop
Downloaded 23 times
Description input file of genepop (11pops,79loci,384 samples)
Download genepop input file.txt (155.7 Kb)
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Title microsatellites data for Structure
Downloaded 7 times
Description input file for Structure (11pops,79loci, 384samples, missdata=-9)
Download structure inputfile.txt (239.7 Kb)
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Title microsatellites data for MSA
Downloaded 8 times
Description input data of MSA (11pops+1pop(outgroup, 7 samples), 79loci, 391samples)
Download MSA input file.dat (240.5 Kb)
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Title microsatellites data for migrate
Downloaded 6 times
Description input file of migrate(11pops, 30 neutral loci, 384samples)
Download migrate inputfile.dat (95.16 Kb)
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Title microsatellites data for Bayesass
Downloaded 10 times
Description input file of bayesass (neutral loci)
Download bayesass inputfile.txt (414.5 Kb)
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Title microsatellites data for DIYABC
Downloaded 23 times
Description input file of DIYABC (neutral loci, 3 groups+1outgroup)
Download DIYABCinputfile.txt (86.83 Kb)
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Title DIYABC settings
Downloaded 87 times
Description The scenarios, parameters and settings of DIYABC (6 different scenarios are including)
Download DIYABC scenarios settings.txt (1.571 Kb)
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When using this data, please cite the original publication:

Zhao Y, Vrieling K, Liao H, Xiao M, Zhu Y, Rong J, Zhang W, Wang Y, Yang J, Chen J, Song Z (2013) Are habitat fragmentation, local adaptation and isolation by distance driving population divergence in wild rice Oryza rufipogon? Molecular Ecology 22(22): 5531–5547. http://dx.doi.org/10.1111/mec.12517

Additionally, please cite the Dryad data package:

Zhao Y, Vrieling K, Liao H, Xiao M, Zhu Y, Rong J, Zhang W, Wang Y, Yang J, Chen J, Song Z (2013) Data from: Are habitat fragmentation, local adaptation and isolation by distance driving population divergence in wild rice Oryza rufipogon? Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.b0qn5
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