Data from: "Transcriptome sequencing of the Queensland fruit fly, Bactrocera tryoni (Diptera: Tephritidae)" in Genomic Resources Notes accepted 1 December 2013 to 31 January 2014

Nagalingam K, Prentis P, Clarke AR

Date Published: March 28, 2014

DOI: http://dx.doi.org/10.5061/dryad.b21r5

 

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Title Contigs from Library 1
Downloaded 19 times
Description An unannotated version of the trascriptome assembly (contigs and unigenes) is presented here.
Download F-Contig.fa (23.65 Mb)
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Title Contigs from Library 2
Downloaded 5 times
Description An unannotated version of the trascriptome assembly (contigs and unigenes) is presented here.
Download UF-Contig.fa (27.14 Mb)
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Title All-Unigene
Downloaded 15 times
Description An unannotated version of the trascriptome assembly (contigs and unigenes) is presented here.
Download All-Unigene.fa (29.03 Mb)
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Title Sequence assembly and Contig annotation
Downloaded 71 times
Description The raw reads were used to generate a de novo assembly. High quality reads were then assembled into contigs and tese contigs were then further assembled into unigenes using paired end information to combine contigs that arose from the same transcript.
Download annotation.xls (16.26 Mb)
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Title Blast hits
Downloaded 13 times
Description All unigenes were screened against protein databases Nr, SwissProt, KEGG and COG using BLASTx (e-value<10-5) and against nucleotide database Nt using BLASTn (e-value<10-5). The best hits were used to determine the sequence direction of the unigenes.
Download All-Unigene.blast.cds.fa (19.30 Mb)
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When using this data, please cite the original publication:

Genomic Resources Development Consortium, Arthofer W, Clarke AR, Kumaran N, Prentis PJ, Schafellner C, Schlick-Steiner, BC, Steiner FM, Wachter GA (2014) Genomic Resources Notes accepted 1 December 2013 – 31 January 2014. Molecular Ecology Resources 14(3): 664–665. http://dx.doi.org/10.1111/1755-0998.12255

Additionally, please cite the Dryad data package:

Nagalingam K, Prentis P, Clarke AR (2014) Data from: "Transcriptome sequencing of the Queensland fruit fly, Bactrocera tryoni (Diptera: Tephritidae)" in Genomic Resources Notes accepted 1 December 2013 to 31 January 2014. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.b21r5
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