Data from: Analysis and visualization of H7 influenza using genomic, evolutionary and geographic information in a modular web service

Janies DA

Date Published: May 23, 2012

DOI: http://dx.doi.org/10.5061/dryad.c2401

 

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Title Table of accession numbers, cleavage site, latitude, longitude for H7 HA segments
Downloaded 36 times
Description Data file from: Analysis and visualization of H7 influenza using genomic, evolutionary, and geographic information in a modular web service. In press Cladistics 2012. Daniel A. Janies, Laura W. Pomeroy, Jacob M. Aaronson, Samuel Handelman, Jori Hardman, Kevin Kawalec, Thomas Bitterman and Ward C. Wheeler. Excel file with the following fields: GISAID accession, cleavage site motif, number of basic amino acids, pathogenicity, latitude, longitude.
Download ALLphenogeographicDec6accsort.xlsx (73.72 Kb)
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Title Keyhole Markup Language (KML) file of the spread of H7 influenza lineages of various pathogenicity.
Downloaded 39 times
Description Data file from: Analysis and visualization of H7 influenza using genomic, evolutionary, and geographic information in a modular web service. In press Cladistics 2012. Daniel A. Janies, Laura W. Pomeroy, Jacob M. Aaronson, Samuel Handelman, Jori Hardman, Kevin Kawalec, Thomas Bitterman and Ward C. Wheeler. KML file for Google Earth (TM) or other geospatial browser be sure to select the statusesdna878126-colored.kml "places" in the panel to the left. Red lines depict high pathogenic lineages, green lines show low pathogenic lineages, and purple lines represent lineages in a borderline state of pathogenicity. Color changes represent evolutionary changes in pathogenicity.
Download statusesdna878126-colored.kmz (941.8 Kb)
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When using this data, please cite the original publication:

Janies DA, Pomeroy LW, Aaronson JM, Handelman S, Hardman J, Kawalec K, Bitterman T, Wheeler WC (2012) Analysis and visualization of H7 influenza using genomic, evolutionary and geographic information in a modular web service. Cladistics 28(5): 483–488. http://dx.doi.org/10.1111/j.1096-0031.2012.00401.x

Additionally, please cite the Dryad data package:

Janies DA (2012) Data from: Analysis and visualization of H7 influenza using genomic, evolutionary and geographic information in a modular web service. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.c2401
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