Data from: Genetic isolation between two recently diverged populations of a symbiotic fungus

Branco S, Gladieux P, Ellison CE, Kuo A, LaButii K, Lipzen A, Grigoriev IV, Liao H, Vilgalys R, Peay KG, Taylor JW, Bruns TD

Date Published: February 27, 2015

DOI: http://dx.doi.org/10.5061/dryad.c400d

 

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Title Suillus brevipes single nucleotide polymorphism list
Downloaded 12 times
Description Raw SNP list from GATK on the Californian montane and coastal S. brevipes populations.
Download Sb_GATK_SNP.vcf (1.262 Gb)
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Title Suillus brevipes Neighbor Joining Tree
Downloaded 11 times
Description S. brevipes SNP NJ tree (without singletons)
Download Suillus brevipes Neighbor Joining Tree (4.478 Kb)
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Title Calculating Population Heterozygocity
Downloaded 36 times
Description Computes observed and expected heterozygosity (under HW assumptions).
Download Heterozygocity_population.py (10.37 Kb)
Download README (340 bytes)
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When using this data, please cite the original publication:

Branco S, Gladieux P, Ellison CE, Kuo A, LaButii K, Lipzen A, Grigoriev IV, Liao H, Vilgalys R, Peay KG, Taylor JW, Bruns TD (2015) Genetic isolation between two recently diverged populations of a symbiotic fungus. Molecular Ecology 24(11): 2747-2758. http://dx.doi.org/10.1111/mec.13132

Additionally, please cite the Dryad data package:

Branco S, Gladieux P, Ellison CE, Kuo A, LaButii K, Lipzen A, Grigoriev IV, Liao H, Vilgalys R, Peay KG, Taylor JW, Bruns TD (2015) Data from: Genetic isolation between two recently diverged populations of a symbiotic fungus. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.c400d
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