Data from: Hybrid origin of European Vipers (Vipera magnifica and Vipera orlovi) from the Caucasus determined using genomic scale DNA markers.

Zinenko O, Sovic M, Joger U, Gibbs HL

Date Published: April 4, 2016

DOI: http://dx.doi.org/10.5061/dryad.c5232

 

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Title RAD_14
Downloaded 21 times
Description This file contains raw single end reads of ddRAD library for the part of specimens used in the paper. The file is zipped. Associated barcode information is in ReadMe file with the same name and extension (could be viewed in txt editor).
Download RAD_14.zip (266.2 Mb)
Download README.fastq (81 bytes)
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Title RAD_40
Downloaded 8 times
Description This file contains raw single end reads of ddRAD library for the part of specimens used in the paper. The file is zipped. Associated barcode information is in ReadMe file with the same name and extension (could be viewed in txt editor).
Download README.fastq (393 bytes)
Download RAD_40.zip (1.021 Gb)
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Title D_st
Downloaded 15 times
Description This is the script which produces all the combinations of sequences from four populations and calculates ABBA-BABA D-statistic
Download D_st.zip (12.14 Kb)
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Title Pop_DStat_Resamp_Binomial
Downloaded 11 times
Description This is the script which calculates population frequency based D statistic and significance of D statistic by resampling from binomial distribution at each locus in each population
Download Pop_DStat_Resamp_Binomial.zip (11.48 Kb)
Download README.txt (380 bytes)
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When using this data, please cite the original publication:

Zinenko O, Sovic M, Joger U, Gibbs HL (2016) Hybrid origin of European Vipers (Vipera magnifica and Vipera orlovi) from the Caucasus determined using genomic scale DNA markers. BMC Evolutionary Biology 16: 76. http://dx.doi.org/10.1186/s12862-016-0647-7

Additionally, please cite the Dryad data package:

Zinenko O, Sovic M, Joger U, Gibbs HL (2016) Data from: Hybrid origin of European Vipers (Vipera magnifica and Vipera orlovi) from the Caucasus determined using genomic scale DNA markers. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.c5232
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