Data from: Genetic variation in the developmental regulation of cortical avpr1a among prairie voles

Okhovat M, Chen IC, Dehghani Z, Zheng D, Ikpatt JE, Momoh H, Phelps SM

Date Published: July 5, 2017

DOI: http://dx.doi.org/10.5061/dryad.c5961

 

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Title MeDIP fold-enrichment data RSC of HI/HI male prairie voles
Downloaded 5 times
Description MeDIP fold-enrichment data (bedgraph format) at the avpr1a locus, calculated against INPUT control from a pool of RSC from 4 HI/HI male prairie voles
Download HI-avpr1a-MeDIP-FE.bdg (432.8 Kb)
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Title MeDIP fold-enrichment data from RSC of LO/LO male prairie voles
Downloaded 7 times
Description MeDIP fold-enrichment data (bedgraph format) at the avpr1a locus (calculated against INPUT control from a pool of RSC from 4 LO/LO male prairie voles.
Download LO-avpr1a-MeDIP-FE.bdg (360.0 Kb)
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Title MeDIP enrichment difference between LO and HI
Downloaded 6 times
Description A bedgraph track for the difference in avpr1a MeDIP enrichments between LO/LO and HI/HI prairie voles in the RSC.
Download LO-subtract-HI-avpr1a-MeDIP.bdg (669.3 Kb)
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Title Ontogeny-meta data
Downloaded 8 times
Description A complete metadata set of all ontogeny data, including animal IDs, genotype, sex, RSC-V1aR, etc. See each tab for study names.
Download Ontogeny-meta data.xlsx (56.12 Kb)
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Title MeDIP and INPUT alignments for HI/HI RSC
Downloaded 3 times
Description bwa generated alignments, quality filtered and sorted bam format
Download HI-alignments.tar.gz (5.893 Gb)
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Title MeDIP and INPUT alignments for LO/LO RSC
Downloaded 5 times
Description bwa generated alignments, quality filtered and sorted bam format
Download LO-alignments.tar.gz (4.527 Gb)
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Title MeDIP and INPUT raw reads for HI/HI RSC
Downloaded 3 times
Download HI-raw-reads.tar.gz (6.217 Gb)
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Title MeDIP and INPUT raw reads for HI/HI RSC
Downloaded 6 times
Download LO-raw-reads.tar.gz (4.914 Gb)
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When using this data, please cite the original publication:

Okhovat M, Chen IC, Dehghani Z, Zheng DJ, Ikpatt J, Momoh H, Phelps SM (2017) Genetic variation in the developmental regulation of cortical avpr1a among prairie voles. Genes, Brain, and Behavior, online in advance of print. http://dx.doi.org/10.1111/gbb.12396

Additionally, please cite the Dryad data package:

Okhovat M, Chen IC, Dehghani Z, Zheng D, Ikpatt JE, Momoh H, Phelps SM (2017) Data from: Genetic variation in the developmental regulation of cortical avpr1a among prairie voles. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.c5961
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