Data from: Highly diverse and spatially heterogeneous mycorrhizal symbiosis in a rare epiphyte is unrelated to broad biogeographic or environmental features

Kartzinel TR, Trapnell DW, Shefferson RP

Date Published: September 20, 2013

DOI: http://dx.doi.org/10.5061/dryad.c6g84

 

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Title ASCO_FASTAS_ALIGNED_58S_OPTSIL
Downloaded 16 times
Description Alignment of 5.8S sequences corresponding to ascomycetes used in clustering analysis by OPTSIL.
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Title BASID_FASTAS_ALIGNED_58S_OPTSIL
Downloaded 18 times
Description Alignment of 5.8S sequences corresponding to basidiomycetes used in clustering analysis by OPTSIL. File is in FASTA format.
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Title TUL_ML56_ALN
Downloaded 10 times
Description Alignment of mitochondrial large subunit ribosomal DNA used in both clustering analysis by OPTSIL and phylogenetic analysis. The file is in FASTA format.
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Title Sebacinales_58s
Downloaded 13 times
Description Alignment of Sebacinales 5.8S used for inferring phylogeny. The file is in phylip format.
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Title Sebacinales_ITS
Downloaded 18 times
Description Alignment of Sebacinales sequences spanning ITS1-5.8S-ITS2 used in analysis of molecular diversity. The file is in FASTA format.
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Title Sebacinales_tree
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Description The tree file for the Sebacinales phylogeny in analysis of phylogenetic variation. The file is in newick format.
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Title Tulasnellaceae_tree
Downloaded 12 times
Description The tree file for the Tulasnellaceae phylogeny in analysis of phylogenetic variation. The file is in newick format.
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Title Tulasnellaceae_58s
Downloaded 13 times
Description Alignment of Tulasnellaceae 5.8S used for inferring the phylogeny. The file is in PHYLIP format.
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Title Tulasnellaceae_ITS
Downloaded 6 times
Description Alignment of Tulasnellaceae sequences spanning ITS1-5.8S-ITS2 used in analysis of molecular variation. The alignment is in FASTA format.
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Title Tulasnellaceae_ML
Downloaded 10 times
Description Alignment of Tulasnellaceae mitochondrial large subunit (mtLSU) used for inferring the phylogeny. The data file is in PHYLIP format.
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Title Tulasnellaceae_MLtree
Downloaded 8 times
Description The tree file for the phylogeny of the Tulasnellaceae mitochondrial large subunit of rDNA (mtLSU). The file is in newick format.
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When using this data, please cite the original publication:

Kartzinel TR, Trapnell DW, Shefferson RP (2013) Highly diverse and spatially heterogeneous mycorrhizal symbiosis in a rare epiphyte is unrelated to broad biogeographic or environmental features. Molecular Ecology 22(23): 5949–5961. http://dx.doi.org/10.1111/mec.12536

Additionally, please cite the Dryad data package:

Kartzinel TR, Trapnell DW, Shefferson RP (2013) Data from: Highly diverse and spatially heterogeneous mycorrhizal symbiosis in a rare epiphyte is unrelated to broad biogeographic or environmental features. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.c6g84
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