Data from: Cultural traditions across a migratory network shape the genetic structure of southern right whales around Australia and New Zealand

Carroll EL, Baker CS, Watson M, Alderman R, Bannister J, Gaggiotti OE, Gröcke DR, Patenaude N, Harcourt R

Date Published: November 13, 2015

DOI: http://dx.doi.org/10.5061/dryad.cc2kq

 

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Title Australian right whale microsatellite and stable isotope data
Downloaded 21 times
Description This file contains the sampling location and state, mtDNA haplotype, sex, stable isotope and multi-locus microsatellite genotype data for Australian southern right whale samples used in the study.
Download SREP16182_SRWdata_Archive.xlsx (62.11 Kb)
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Title Comparing_stable_isotope&genetic_similarity_files
Downloaded 18 times
Description Dryad Archive for SREP16182: SI_SRW_data.zip. This zip file contains: 1 - Files of estimates of pairwise relatedness generated from microsatellite loci in SREP16182_SRWdata_Archive in the program COANCESTRY, using the kinship estimators of Lynch & Ritland 1999 (Lynch&Ritland_relatedness.txt) and Ritland 1996 (Ritland_relatedness.txt). 2 – Files of sample stable isotope values for both d13C (Sample_dC.txt) and d15N (Sample_dN.txt), as well as pairwise similarities of d13C calculated using Euclidean distance in program GENODIVE (dC_euclidean_correct_names.gdv). 3 – A file that includes d13C, d15N, mtDNA, sampling location and sex ID data for the samples used in the GLM work (SI_data_Aus_SRWtxt.txt) 4 – R code for (1) running the comparison of similarities between d13C and microsatellite-based kinship estimators and (2) running GLMs on d13C data, with mtDNA, sex and sampling state as potential explanatory factors. R code is annotated so it can be easily run if the files are placed in the appropriate files and required packages are downloaded.
Download SI_SRW_data.zip (34.86 Kb)
Download README.txt (1.061 Kb)
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When using this data, please cite the original publication:

Carroll EL, Baker CS, Watson M, Alderman R, Bannister J, Gaggiotti OE, Gröcke DR, Patenaude N, Harcourt R (2015) Cultural traditions across a migratory network shape the genetic structure of southern right whales around Australia and New Zealand. Scientific Reports 5:16182. http://dx.doi.org/10.1038/srep16182

Additionally, please cite the Dryad data package:

Carroll EL, Baker CS, Watson M, Alderman R, Bannister J, Gaggiotti OE, Gröcke DR, Patenaude N, Harcourt R (2015) Data from: Cultural traditions across a migratory network shape the genetic structure of southern right whales around Australia and New Zealand. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.cc2kq
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