Data from: An integrated approach reveals regulatory controls on bacterial translation elongation

Subramaniam AR, Zid BM, O'Shea EK

Date Published: November 22, 2014

DOI: http://dx.doi.org/10.5061/dryad.ch352

 

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Title Code tarball for simulation, data analysis and reproduction of figures
Downloaded 25 times
Description This tarball contains 4 IPython Notebook files and a static html version of each Notebook. The IPython Notebooks provide the code for running the simulation (E. coli and yeast separate), the sequencing and simulation data analysis, and reproduction of most figures from the paper. Use tar -xvzf filename to expand.
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Title Simulation results tarball
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Description This tarball contains the raw output results of running all the simulations (present as 10 subfolders). Expand output_files.tar.gz within the notebook_html_files folder.
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When using this data, please cite the original publication:

Subramaniam AR, Zid BM, O'Shea EK (2014) An integrated approach reveals regulatory controls on bacterial translation elongation. Cell 159(5): 1200–1211. http://dx.doi.org/10.1016/j.cell.2014.10.043

Additionally, please cite the Dryad data package:

Subramaniam AR, Zid BM, O'Shea EK (2014) Data from: An integrated approach reveals regulatory controls on bacterial translation elongation. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.ch352
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