Data from: Phylogenomics using formalin-fixed and 100+ year old intractable natural history specimens

Ruane S, Austin CC

Date Published: January 27, 2017

DOI: http://dx.doi.org/10.5061/dryad.cm28r.2

 

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Title Phylips&trees
Downloaded 17 times
Description Includes the 50% missing data alignment/resulting tree and the 35% missing data (i.e., 65% complete) alignment/resulting tree .
Download ESM3_Phylips&trees.zip (7.879 Mb)
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Title Extraction_protocol
Downloaded 74 times
Description Extraction protocol followed in the manuscript.
Download Extraction_protocol_Jan26_2017.docx (21.07 Kb)
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Title Abyss contigs
Downloaded 7 times
Description The assembled contigs for each sequenced individual from Abyss, including the negative control.
Download contigs.zip (27.00 Mb)
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Title all_snakes_dataset1_informative_sites.inf.taxon
Downloaded 11 times
Description Tab delimited text files with information for resulting UCE loci for both the 50% missing data matrix and the 35% missing data matrix (i.e., 65% complete).
Download all_snakes_dataset1_informative_sites.inf...on.zip (130.7 Kb)
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Title Final_Specimen&LibraryPrep
Downloaded 8 times
Description Excel file (with two tabs) with details on specimens and library prep information.
Download Final_Specimen&LibraryPrep.xlsx (28.62 Kb)
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When using this data, please cite the original publication:

Ruane S, Austin CC (2017) Phylogenomics using formalin-fixed and 100+ year old intractable natural history specimens. Molecular Ecology, online in advance of print. http://dx.doi.org/10.1111/1755-0998.12655

Additionally, please cite the Dryad data package:

Ruane S, Austin CC (2017) Data from: Phylogenomics using formalin-fixed and 100+ year old intractable natural history specimens. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.cm28r.2
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