Data from: A migratory divide in the Painted Bunting (Passerina ciris)

Battey CJ, Linck EB, Epperly KL, French C, Slager DL, Sykes PW, Klicka J

Date Published: September 5, 2017

DOI: https://doi.org/10.5061/dryad.cp40s

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Title Pciris_mtDNA_ND2
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Description ND2 sequence alignment in phylip format
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Title R_scripts
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Description R scripts used for multivariate genomic analysis, mtDNA analysis, morphology, dadi data preparation, dadi model to demographic value conversion, and all figures.
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Title specimen_data
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Description Museum and band numbers for specimens analyzed in this study, plus wing length and tarsus measurements for interior samples.
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Title ddRAD_assembly
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Description ddRAD sequence assembly in vcf and structure format, and pyRAD sequence assembly parameters file.
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Title dadi
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Description demographic analysis (dadi) python scripts and dadi-formatted input file.
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Title Pciris_reads_1of6
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Description 100bp SR sequence reads from an illumina Hiseq 2500 for Passerina ciris. Library prepped via ddRAD protocol with enzymes sbf1 and msp1. Reads were demultiplexed in pyrad v 3-0-65 (command "pyrad -p params.txt -s 1") but have had no other processing.
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Title Pciris_reads_2of6
Downloaded 6 times
Description 100bp SR sequence reads from an illumina Hiseq 2500 for Passerina ciris. Library prepped via ddRAD protocol with enzymes sbf1 and msp1. Reads were demultiplexed in pyrad v 3-0-65 (command "pyrad -p params.txt -s 1") but have had no other processing.
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Title Pciris_reads_3of6
Downloaded 5 times
Description 100bp SR sequence reads from an illumina Hiseq 2500 for Passerina ciris. Library prepped via ddRAD protocol with enzymes sbf1 and msp1. Reads were demultiplexed in pyrad v 3-0-65 (command "pyrad -p params.txt -s 1") but have had no other processing.
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Title Pciris_reads_4of6
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Description 100bp SR sequence reads from an illumina Hiseq 2500 for Passerina ciris. Library prepped via ddRAD protocol with enzymes sbf1 and msp1. Reads were demultiplexed in pyrad v 3-0-65 (command "pyrad -p params.txt -s 1") but have had no other processing.
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Title Pciris_reads_5of6
Downloaded 5 times
Description 100bp SR sequence reads from an illumina Hiseq 2500 for Passerina ciris. Library prepped via ddRAD protocol with enzymes sbf1 and msp1. Reads were demultiplexed in pyrad v 3-0-65 (command "pyrad -p params.txt -s 1") but have had no other processing.
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Title Pciris_reads_6of6
Downloaded 5 times
Description 100bp SR sequence reads from an illumina Hiseq 2500 for Passerina ciris. Library prepped via ddRAD protocol with enzymes sbf1 and msp1. Reads were demultiplexed in pyrad v 3-0-65 (command "pyrad -p params.txt -s 1") but have had no other processing.
Download Pciris_reads_6of6.zip (333.1 Mb)
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When using this data, please cite the original publication:

Citation is not yet available for this publication from The American Naturalist. It will become available shortly after the publication appears.

Additionally, please cite the Dryad data package:

Battey CJ, Linck EB, Epperly KL, French C, Slager DL, Sykes PW, Klicka J (2017) Data from: A migratory divide in the Painted Bunting (Passerina ciris). Dryad Digital Repository. https://doi.org/10.5061/dryad.cp40s
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