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dc.contributor.author Battey, Christopher J.
dc.contributor.author Linck, Ethan B
dc.contributor.author Epperly, Kevin L
dc.contributor.author French, Cooper
dc.contributor.author Slager, David L
dc.contributor.author Sykes, Paul W
dc.contributor.author Klicka, John
dc.coverage.spatial North America
dc.date.accessioned 2017-09-05T18:12:07Z
dc.date.available 2017-09-05T18:12:07Z
dc.date.issued 2017-09-05
dc.identifier doi:10.5061/dryad.cp40s
dc.identifier.uri http://hdl.handle.net/10255/dryad.156303
dc.description In the Painted Bunting (Passerina ciris), a North American songbird, populations on the Atlantic coast and interior southern United States are known to be allopatric during the breeding season, but efforts to map connectivity with wintering ranges have been largely inconclusive. Using genomic and morphological data from museum specimens and banded birds, we found evidence of three genetically differentiated Painted Bunting populations with distinct wintering ranges and molt-migration phenologies. In addition to confirming that the Atlantic coast population remains allopatric throughout the annual cycle, we identified an unexpected migratory divide within the interior breeding range. Populations breeding in Louisiana winter on the Yucatán Peninsula, and are parapatric with other interior populations that winter in mainland Mexico and Central America. Across the interior breeding range, genetic ancestry is also associated with variation in wing length, suggesting that selection may be promoting morphological divergence in populations with different migration strategies.
dc.relation.haspart doi:10.5061/dryad.cp40s/1
dc.relation.haspart doi:10.5061/dryad.cp40s/2
dc.relation.haspart doi:10.5061/dryad.cp40s/3
dc.relation.haspart doi:10.5061/dryad.cp40s/4
dc.relation.haspart doi:10.5061/dryad.cp40s/5
dc.relation.haspart doi:10.5061/dryad.cp40s/6
dc.relation.haspart doi:10.5061/dryad.cp40s/7
dc.relation.haspart doi:10.5061/dryad.cp40s/8
dc.relation.haspart doi:10.5061/dryad.cp40s/9
dc.relation.haspart doi:10.5061/dryad.cp40s/10
dc.relation.haspart doi:10.5061/dryad.cp40s/11
dc.subject Bird
dc.subject Genetics: population
dc.subject Genomics
dc.subject Genomics: evolutionary
dc.subject Migration
dc.subject Neotropical bird
dc.subject Phylogeography
dc.subject Systematics
dc.title Data from: A migratory divide in the Painted Bunting (Passerina ciris)
dc.type Article
dc.contributor.correspondingAuthor Battey, Christopher J.
prism.publicationName The American Naturalist

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Title Pciris_mtDNA_ND2
Downloaded 5 times
Description ND2 sequence alignment in phylip format
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Title R_scripts
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Description R scripts used for multivariate genomic analysis, mtDNA analysis, morphology, dadi data preparation, dadi model to demographic value conversion, and all figures.
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Title specimen_data
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Description Museum and band numbers for specimens analyzed in this study, plus wing length and tarsus measurements for interior samples.
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Title ddRAD_assembly
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Description ddRAD sequence assembly in vcf and structure format, and pyRAD sequence assembly parameters file.
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Title dadi
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Description demographic analysis (dadi) python scripts and dadi-formatted input file.
Download dadi.zip (46.88 Kb)
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Title Pciris_reads_1of6
Downloaded 5 times
Description 100bp SR sequence reads from an illumina Hiseq 2500 for Passerina ciris. Library prepped via ddRAD protocol with enzymes sbf1 and msp1. Reads were demultiplexed in pyrad v 3-0-65 (command "pyrad -p params.txt -s 1") but have had no other processing.
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Title Pciris_reads_2of6
Downloaded 6 times
Description 100bp SR sequence reads from an illumina Hiseq 2500 for Passerina ciris. Library prepped via ddRAD protocol with enzymes sbf1 and msp1. Reads were demultiplexed in pyrad v 3-0-65 (command "pyrad -p params.txt -s 1") but have had no other processing.
Download Pciris_reads_2of6.zip (901.8 Mb)
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Title Pciris_reads_3of6
Downloaded 5 times
Description 100bp SR sequence reads from an illumina Hiseq 2500 for Passerina ciris. Library prepped via ddRAD protocol with enzymes sbf1 and msp1. Reads were demultiplexed in pyrad v 3-0-65 (command "pyrad -p params.txt -s 1") but have had no other processing.
Download Pciris_reads_3of6.zip (812.1 Mb)
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Title Pciris_reads_4of6
Downloaded 5 times
Description 100bp SR sequence reads from an illumina Hiseq 2500 for Passerina ciris. Library prepped via ddRAD protocol with enzymes sbf1 and msp1. Reads were demultiplexed in pyrad v 3-0-65 (command "pyrad -p params.txt -s 1") but have had no other processing.
Download Pciris_reads_4of6.zip (868.6 Mb)
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Title Pciris_reads_5of6
Downloaded 5 times
Description 100bp SR sequence reads from an illumina Hiseq 2500 for Passerina ciris. Library prepped via ddRAD protocol with enzymes sbf1 and msp1. Reads were demultiplexed in pyrad v 3-0-65 (command "pyrad -p params.txt -s 1") but have had no other processing.
Download Pciris_reads_5of6.zip (571.8 Mb)
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Title Pciris_reads_6of6
Downloaded 5 times
Description 100bp SR sequence reads from an illumina Hiseq 2500 for Passerina ciris. Library prepped via ddRAD protocol with enzymes sbf1 and msp1. Reads were demultiplexed in pyrad v 3-0-65 (command "pyrad -p params.txt -s 1") but have had no other processing.
Download Pciris_reads_6of6.zip (333.1 Mb)
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