Data from: Taxon sampling to address an ancient rapid radiation: a supermatrix phylogeny of early brachyceran flies (Diptera)

Shin S, Bayless KM, Winterton SL, Dikow T, Lessard BD, Yeates DK, Wiegmann BM, Trautwein MD

Date Published: November 13, 2017

DOI: https://doi.org/10.5061/dryad.cq63m

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Title Supplementary Fig. S1.
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Description Best ML tree with branch support from 100 thorough bootstrap replicates for dataset i, ALL
Download SI_FIG_1_100BT_data_i.pdf (87.35 Kb)
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Title Supplementary Fig. S2.
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Description Best ML tree with branch support from 100 thorough bootstrap replicates for dataset ii, MISSING
Download SI_FIG_2_100BT_data_ii_p.pdf (87.17 Kb)
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Title Supplementary Fig. S3.
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Description Best ML tree with branch support from 100 thorough bootstrap replicates for dataset iii, COVERAGE
Download SI_FIG_3_100BT_data_iii_p.pdf (86.35 Kb)
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Title Supplementary Fig. S4.
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Description Best ML tree with branch support from 100 thorough bootstrap replicates for dataset iv, ALL_ROGUE
Download SI_FIG_4_100BT_data_iv_p.pdf (78.13 Kb)
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Title Supplementary Fig. S5.
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Description Best ML tree with branch support from 100 thorough bootstrap replicates for dataset v, MISSING_ROGUE
Download SI_FIG_5_100BT_data_v.pdf (80.35 Kb)
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Title Supplementary Fig. S6.
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Description Best ML tree with branch support from 100 thorough bootstrap replicates for dataset vi, COVERAGE_ROGUE
Download SI_FIG_6_100BT_data_vi.pdf (77.85 Kb)
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Title Supplementary Fig. S7.
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Description Best ML tree with branch support from 100 rapid bootstrap replicates with outgroup Nematocera
Download SI_Fig_7_all.pdf (79.38 Kb)
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Title Table_S1
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Description Gene and taxon coverage for dataset ‘i’ with species name, rogue taxa selection list for all 6 datasets.
Download Table_S1.xlsx (139.4 Kb)
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Title ML_tree_files
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Description Maximum Likelihood bipartitions tree files for Supplementary Figs. S1-S7.
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Title phylip files for each dataset
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Description Phylip format files for all 6 datasets.
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When using this data, please cite the original publication:

SHIN S, BAYLESS KM, WINTERTON SL, DIKOW T, LESSARD BD, YEATES DK, WIEGMANN BM, TRAUTWEIN MD (2017) Taxon sampling to address an ancient rapid radiation: a supermatrix phylogeny of early brachyceran flies (Diptera). Systematic Entomology, online in advance of print. https://doi.org/10.1111/syen.12275

Additionally, please cite the Dryad data package:

Shin S, Bayless KM, Winterton SL, Dikow T, Lessard BD, Yeates DK, Wiegmann BM, Trautwein MD (2017) Data from: Taxon sampling to address an ancient rapid radiation: a supermatrix phylogeny of early brachyceran flies (Diptera). Dryad Digital Repository. https://doi.org/10.5061/dryad.cq63m
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