Data from: Molecular insights into the lichen genus Alectoria (Parmeliaceae) in North America

McMullin RT, Lendemer JC, Braid HE, Newmaster SG

Date Published: February 18, 2016

DOI: http://dx.doi.org/10.5061/dryad.ct140

 

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Title original alignment for ITS
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Download AlecITSNEX3.nex (56.93 Kb)
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Title original alignment for MCM7
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Download ALECMCM7NEX2.nex (25.92 Kb)
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Title original alignment for ITS+MCM7
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Download alectoria_ITS_MCM7_combined (1).nex (104.3 Kb)
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Title input dataset for ITS ML analysis
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Download AlecITSNEX4.phy (19.24 Kb)
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Title input dataset for MCM7 ML analysis
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Download ALECMCM7NEX2.phy (18.69 Kb)
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Title input dataset for mtSSU ML analysis
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Download Alectoria_mtssu.phy (9.225 Kb)
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Title input dataset for ITS+MCM7 combined ML analysis
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Download ML_alectoria_ITS_MCM7_combined.phy (104.1 Kb)
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Title input dataset for ITS+MCM7 combined BI analysis
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Download BI_Alectoria_COMBINED.nex (103.9 Kb)
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Title output of results for initial mtSSU analysis with ML
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Download RAxML_bipartitions.Alectoria_mtssu_ML.pdf (2.181 Kb)
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Title output of results for initial MCM7 analysis with ML
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Download RAxML_bipartitions.Alectoria_McM7_ML.pdf (3.381 Kb)
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Title output of results for initial ITS analysis with ML
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Download RAxML_bipartitions.Alectoria_ITS_ML.pdf (3.468 Kb)
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Title output of results for initial ITS+McM7 analysis with M_combined
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Download RAxML_bipartitions.Alectoria_combined_ITS...ML.pdf (3.882 Kb)
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When using this data, please cite the original publication:

McMullin RT, Lendemer JC, Braid HE, Newmaster SG (2016) Molecular insights into the lichen genus Alectoria (Parmeliaceae) in North America. Botany 94(3): 165-175. http://dx.doi.org/10.1139/cjb-2015-0186

Additionally, please cite the Dryad data package:

McMullin RT, Lendemer JC, Braid HE, Newmaster SG (2016) Data from: Molecular insights into the lichen genus Alectoria (Parmeliaceae) in North America. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.ct140
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