MySQL database for gene expression analysis
MySQL database for the transcriptional, network connectedness, molecular evolution, and GO term analysis
monomorium_2014-12-08.sql.gz
Data tables from MySQL database for gene expression analysis
separated data tables from MySQL database as zipped .csv files for the transcriptional, network connectedness, molecular evolution, and GO term analysis
monomorium tables.zip
data summary by gene
summary of data listed by M. pharaonis gene in comma deliminated (.csv) format. Header line with variables: gene is the M. pharaonis gene name; SINV homolog is the identified Solenopsis invicta homolog; SINVhomologexpression is whether the identified SINVhomolg was upregulated in workers that were in the nest vs. foraging area according to Manfredini et al. 2013; dNdS is the estimate of rate of molecular evolution; kTotal, kWithin, kOut, kDiff are the estimated of network connectedness from WGCNA; behavioral cateogry is whether the gene is upregulated in foragers, nurses, or not differentially expressed (nde); fpkm is the level of expression; evalue, hit, and species describe the best
BLAST hit
raw behavioral scan data
table in .csv format of raw behavioral scan data showing each observation of age-marked individuals.Header line with variables: colony is whether the observation is from replicate colony b or c; date is the data of observation; age is the age of observed age-marked individual workers; behavior is the behavioral code, which is described in the Supplemental Table 1.csv
total behavioral counts by age class
table in csv format of total counts for each age cohort. Header column with variable: age is the age cohort of individuals observed; the remaining columns are the behavioral categories that significantly changed over the course of the study
README
README description of data files