Data from: Morphological identification and single-cell genomics of marine diplonemids

Gawryluk RMR, del Campo J, Okamoto N, Strassert JFH, Lukes J, Richards TA, Worden AZ, Santoro AE, Keeling PJ

Date Published: November 23, 2016

DOI: http://dx.doi.org/10.5061/dryad.d19j0

 

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Title Single-cell genomic scaffolds from 10 'wild-caught' marine diplonemids
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Description FASTA format single-cell genomic scaffolds of 10 marine diplonemid (protist) cells are presented. Scaffolds were generated with the SPAdes assembler; contaminating sequences were removed, as described in the publication. Each FASTA file is derived from a single cell. Cells are referred to by the numbers used in the publication (i.e., cells 3, 13, 21, 27, 37, 47, 1sb, 4sb, 9sb, 21sb) as no species names exist.
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Title Figure S1 (related to Figure 1). Taxon-annotated GC plots demonstrate the effectiveness of our decontamination procedure.
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Description Plots were generated using blobtools (https://github.com/DRL/blobtools) for each SCG assembly before and after decontamination using the megablast/blastx protocol described in Experimental Procedures. Plots are based on megablast queries of the NCBI nt database according to taxonomic Order.
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When using this data, please cite the original publication:

Gawryluk RMR, del Campo J, Okamoto N, Strassert JFH, Lukes J, Richards TA, Worden AZ, Santoro AE, Keeling PJ (2016) Morphological identification and single-cell genomics of marine diplonemids. Current Biology 26(22): 3053–3059. http://dx.doi.org/10.1016/j.cub.2016.09.013

Additionally, please cite the Dryad data package:

Gawryluk RMR, del Campo J, Okamoto N, Strassert JFH, Lukes J, Richards TA, Worden AZ, Santoro AE, Keeling PJ (2016) Data from: Morphological identification and single-cell genomics of marine diplonemids. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.d19j0
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