Data from: Metatranscriptomics of the human oral microbiome during health and disease

Jorth P, Turner KH, Gumus P, Nizam N, Buduneli N, Whiteley M

Date Published: April 4, 2014

DOI: http://dx.doi.org/10.5061/dryad.d41v4

 

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title Periodontitis diseased sample, patient 1, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 1 diseased periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJD1.join.fastq (23.75 Mb)
Details View File Details
Title Periodontitis diseased sample, patient 2, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 2 diseased periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJD2.join.fastq (37.03 Mb)
Details View File Details
Title Periodontitis diseased sample, patient 3, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 3 diseased periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJD3.join.fastq (30.59 Mb)
Download PJD3.join.fastq (30.59 Mb)
Details View File Details
Title Periodontitis diseased sample, patient 4, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 4 diseased periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJD4.join.fastq (24.93 Mb)
Details View File Details
Title Periodontitis diseased sample, patient 5, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 5 diseased periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJD5.join.fastq (32.52 Mb)
Details View File Details
Title Periodontitis diseased sample, patient 6, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 6 diseased periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJD6.join.fastq (21.17 Mb)
Details View File Details
Title Periodontitis diseased sample, patient 7, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 7 diseased periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJD7.join.fastq (28.36 Mb)
Details View File Details
Title Periodontitis diseased sample, patient 8, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 8 diseased periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJD8.join.fastq (27.91 Mb)
Details View File Details
Title Periodontitis diseased sample, patient 9, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 9 diseased periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJD9.join.fastq (16.24 Mb)
Details View File Details
Title Periodontitis diseased sample, patient 10, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 10 diseased periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJD10.join.fastq (34.13 Mb)
Details View File Details
Title Paired healthy sample, patient 1, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 1 healthy periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJH1.join.fastq (6.903 Mb)
Details View File Details
Title Paired healthy sample, patient 2, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 2 healthy periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJH2.join.fastq (6.291 Mb)
Details View File Details
Title Paired healthy sample, patient 3, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 3 healthy periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJH3.join.fastq (5.786 Mb)
Details View File Details
Title Paired healthy sample, patient 4, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 4 healthy periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJH4.join.fastq (13.57 Mb)
Details View File Details
Title Paired healthy sample, patient 5, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 5 healthy periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJH5.join.fastq (13.74 Mb)
Details View File Details
Title Paired healthy sample, patient 6, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 6 healthy periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJH6.join.fastq (21.02 Mb)
Details View File Details
Title Paired healthy sample, patient 7, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 7 healthy periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJH7.join.fastq (4.361 Mb)
Details View File Details
Title Paired healthy sample, patient 8, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 8 healthy periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJH8.join.fastq (15.65 Mb)
Details View File Details
Title Paired healthy sample, patient 9, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 9 healthy periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJH9.join.fastq (13.55 Mb)
Details View File Details
Title Paired healthy sample, patient 10, 16S rRNA sequences
Description Bacterial 16S rRNA sequences from patient 10 healthy periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download PJH10.join.fastq (9.876 Mb)
Details View File Details
Title Periodontitis diseased sample, patient 1, 16S rRNA gene sequences
Description Bacterial 16S rRNA gene sequences from patient 1 diseased periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download D1_16dnajoin.fastq (900.2 Mb)
Details View File Details
Title Periodontitis diseased sample, patient 2, 16S rRNA gene sequences
Description Bacterial 16S rRNA gene sequences from patient 2 diseased periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download D2_16dnajoin.fastq (989.9 Mb)
Details View File Details
Title Periodontitis diseased sample, patient 3, 16S rRNA gene sequences
Description Bacterial 16S rRNA gene sequences from patient 3 diseased periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join.
Download D3_16dnajoin.fastq.tar.gz (342.6 Mb)
Details View File Details
Title Paired healthy sample, patient 1, 16S rRNA gene sequences
Description Bacterial 16S rRNA gene sequences from patient 1 healthy periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join. This file has been compressed.
Download H1_16dnajoin.fastq.tar.gz (29.48 Mb)
Details View File Details
Title Paired healthy sample, patient 2, 16S rRNA gene sequences
Description Bacterial 16S rRNA gene sequences from patient 2 healthy periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join. This file has been compressed.
Download H2_16dnajoin.fastq.tar.gz (29.98 Mb)
Details View File Details
Title Paired healthy sample, patient 3, 16S rRNA gene sequences
Description Bacterial 16S rRNA gene sequences from patient 3 healthy periodontal sites. Sequences are read 1 and read 2 from MiSeq sequencing joined with the script fastq-join. This file has been compressed.
Download H3_16dnajoin.fastq.tar.gz (258.2 Mb)
Details View File Details

When using this data, please cite the original publication:

Jorth P, Turner KH, Gumus P, Nizam N, Buduneli N, Whiteley M (2014) Metatranscriptomics of the human oral microbiome during health and disease. mBio 5(2): e01012-14. http://dx.doi.org/10.1128/mBio.01012-14

Additionally, please cite the Dryad data package:

Jorth P, Turner KH, Gumus P, Nizam N, Buduneli N, Whiteley M (2014) Data from: Metatranscriptomics of the human oral microbiome during health and disease. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.d41v4
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Submissions have been temporarily disabled.

Search for data

Be part of Dryad

We encourage organizations to: