Data from: Whole genome sequencing shows sleeping sickness relapse is due to parasite regrowth and not reinfection

Richardson J, Evans B, Pyana P, Van Reet N, Sistrom M, Buscher P, Aksoy S, Caccone A

Date Published: October 8, 2015

DOI: http://dx.doi.org/10.5061/dryad.d58b8

 

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Title 15RE_R1
Downloaded 7 times
Description First read pairs for Sample 15 BT-RE, in fastq format. See Table 1 in text.
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Title 15RE_R2
Downloaded 2 times
Description Second read pairs for Sample 15 BT-RE, in fastq format. See Table 1 in text.
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Title 45BT_R1
Downloaded 1 time
Description First read pairs for Sample 45 BT, in fastq format. See Table 1 in text.
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Title 45BT_R2
Downloaded 1 time
Description Second read pairs for Sample 45 BT, in fastq format. See Table 1 in text.
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Title 57AT_R1
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Description First read pairs for Sample 57 AT, in fastq format. See Table 1 in text.
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Title 57AT_R2
Downloaded 2 times
Description Second read pairs for Sample 57 AT, in fastq format. See Table 1 in text.
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Title 85BT_R1
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Description First read pairs for Sample 85 BT, in fastq format. See Table 1 in text.
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Title 85BT_R2
Downloaded 1 time
Description Second read pairs for Sample 85 BT, in fastq format. See Table 1 in text.
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Title 141BT_R1
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Description First read pairs for Sample 141 BT, in fastq format. See Table 1 in text.
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Title 141BT_R2
Downloaded 3 times
Description Second read pairs for Sample 141 BT, in fastq format. See Table 1 in text.
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Title 146AT_R1
Downloaded 2 times
Description First read pairs for Sample 146 AT, in fastq format. See Table 1 in text.
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Title 146AT_R2
Downloaded 2 times
Description Second read pairs for Sample 146 AT, in fastq format. See Table 1 in text.
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Title 146BT_R1
Description First read pairs for Sample 146 BT, in fastq format. See Table 1 in text.
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Title 146BT_R2
Downloaded 2 times
Description Second read pairs for Sample 146 BT, in fastq format. See Table 1 in text.
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Title 148AT_R1
Downloaded 1 time
Description First read pairs for Sample 148 AT, in fastq format. See Table 1 in text.
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Title 148AT_R2
Downloaded 3 times
Description Second read pairs for Sample 148 AT, in fastq format. See Table 1 in text.
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Title 148BT_R1
Downloaded 2 times
Description First read pairs for Sample 148 BT, in fastq format. See Table 1 in text.
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Title 148BT_R2
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Description Second read pairs for Sample 148 BT, in fastq format. See Table 1 in text.
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Title 163AT_R1
Downloaded 1 time
Description First read pairs for Sample 163 AT, in fastq format. See Table 1 in text.
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Title 163AT_R2
Downloaded 3 times
Description Second read pairs for Sample 163 AT, in fastq format. See Table 1 in text.
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Title 163REL_R1
Downloaded 1 time
Description First read pairs for Sample 163 AT-RE, in fastq format. See Table 1 in text.
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Title 163REL_R2
Downloaded 3 times
Description Second read pairs for Sample 163 AT-RE, in fastq format. See Table 1 in text.
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Title 340AT_R1
Downloaded 2 times
Description First read pairs for Sample 340 AT, in fastq format. See Table 1 in text.
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Title 340AT_R2
Downloaded 3 times
Description Second read pairs for Sample 340 AT, in fastq format. See Table 1 in text.
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Title 346AT_R1
Downloaded 1 time
Description First read pairs for Sample 346 AT, in fastq format. See Table 1 in text.
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Title 346AT_R2
Downloaded 3 times
Description Second read pairs for Sample 346 AT, in fastq format. See Table 1 in text.
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Title 346REL_R1
Downloaded 1 time
Description First read pairs for Sample 346 AT-RE, in fastq format. See Table 1 in text.
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Title 346REL_R2
Downloaded 1 time
Description Second read pairs for Sample 346 AT-RE, in fastq format. See Table 1 in text.
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Title 346BT_R1
Downloaded 3 times
Description First read pairs for Sample 346 BT, in fastq format. See Table 1 in text.
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Title 346BT_R2
Downloaded 1 time
Description Second read pairs for Sample 346 BT, in fastq format. See Table 1 in text.
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Title 348BT_R1
Downloaded 1 time
Description First read pairs for Sample 348 BT, in fastq format. See Table 1 in text.
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Title 348BT_R2
Downloaded 1 time
Description Second read pairs for Sample 348 BT, in fastq format. See Table 1 in text.
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Title 349AT_R1
Downloaded 3 times
Description First read pairs for Sample 349 AT, in fastq format. See Table 1 in text.
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Title 349AT_R2
Downloaded 2 times
Description Second read pairs for Sample 349 AT, in fastq format. See Table 1 in text.
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Title 349BT_R1
Downloaded 1 time
Description First read pairs for Sample 349 BT, in fastq format. See Table 1 in text.
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Title 349BT_R2
Downloaded 2 times
Description Second read pairs for Sample 349 BT, in fastq format. See Table 1 in text.
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Title 378BT_R1
Downloaded 4 times
Description First read pairs for Sample 378 BT, in fastq format. See Table 1 in text.
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Title 378BT_R2
Downloaded 2 times
Description Second read pairs for Sample 378 BT, in fastq format. See Table 1 in text.
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When using this data, please cite the original publication:

Richardson J, Evans B, Pyana P, Van Reet N, Sistrom M, Buscher P, Aksoy S, Caccone A (2016) Whole genome sequencing shows sleeping sickness relapse is due to parasite regrowth and not reinfection. Evolutionary Applications, 9(2): 381-393. http://dx.doi.org/10.1111/eva.12338

Additionally, please cite the Dryad data package:

Richardson J, Evans B, Pyana P, Van Reet N, Sistrom M, Buscher P, Aksoy S, Caccone A (2015) Data from: Whole genome sequencing shows sleeping sickness relapse is due to parasite regrowth and not reinfection. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.d58b8
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