Data from: A gateway for phylogenetic analysis powered by grid computing featuring GARLI 2.0

Bazinet AL, Zwickl DJ, Cummings MP

Date Published: April 23, 2014

DOI: http://dx.doi.org/10.5061/dryad.d7639

 

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Title Supplemental Material
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Description Supplemental material associated with the Systematic Biology article, "A Gateway for Phylogenetic Analysis Powered by Grid Computing Featuring GARLI 2.0".
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Title Supplemental Table 1
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Description A snapshot of information associated with The Lattice Project grid resources. The resources are shown sorted by composite throughput rating.
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Title Supplemental Figure 1
Downloaded 64 times
Description The file repository belonging to an example registered user. Registered users may select from among the files found in their repository when specifying input files for a GARLI analysis, in addition to being able to upload new files.
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Title Supplemental Figure 2
Downloaded 59 times
Description The create job page found at molecularevolution.org, as viewed by a registered user.
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Title Supplemental Figure 3
Downloaded 64 times
Description The job status page found at molecularevolution.org, as viewed by a registered user.
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Title Supplemental Figure 4
Downloaded 34 times
Description The job details page found at molecularevolution.org, as viewed by a registered user.
Download supplemental_figure_4.pdf (52.10 Kb)
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Title Supplemental Figure 5
Downloaded 49 times
Description The partitioned analysis portion of the create job page, currently showing a guided mode specification of two character sets and two data subsets.
Download supplemental_figure_5.pdf (55.10 Kb)
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Title Supplemental Figure 6
Downloaded 39 times
Description Partial output summarizing the results of 100 search replicates for the best tree. Among the results of the post-processing displayed here are summary statistics that characterize the distribution of log-likelihood scores, symmetric tree distances (raw and normalized), and estimates of the number of search replicates required to recover the best tree topology at three probability levels.
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When using this data, please cite the original publication:

Bazinet AL, Zwickl DJ, Cummings MP (2014) A gateway for phylogenetic analysis powered by grid computing featuring GARLI 2.0. Systematic Biology 63(5): 812-818. http://dx.doi.org/10.1093/sysbio/syu031

Additionally, please cite the Dryad data package:

Bazinet AL, Zwickl DJ, Cummings MP (2014) Data from: A gateway for phylogenetic analysis powered by grid computing featuring GARLI 2.0. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.d7639
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