Data from: Speciation in mountain refugia: phylogeography and demographic history of the pine siskin and black-capped siskin complex

Alvarez S, Salter JF, McCormack JE, Milá B

Date Published: October 13, 2015

DOI: http://dx.doi.org/10.5061/dryad.dd3qs

 

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Title ND2 haplotype alignemt of the pine siskin and black-capped siskin complex
Downloaded 5 times
Description Spinus pinus, Spinus atriceps and Spinus notatus haplotype alignment; NADH dehydrogenase subunit 2 (ND2) gene, partial cds; mitochondrial
Download pisi nd2 haps.fas (24.82 Kb)
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Title ATP haplotype alignemt of the pine siskin and black-capped siskin complex
Downloaded 5 times
Description Spinus pinus, Spinus atriceps and Spinus notatus haplotype alignment; cytochrome c oxidase subunit II gene, partial cds; tRNA-Lys gene, complete sequence; ATP synthase 8 gene, complete cds; and ATP synthase 6 gene, partial cds; mitochondrial
Download pisi atp haps.fas (24.40 Kb)
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Title GAPDH haplotype alignemt of the pine siskin and black-capped siskin complex
Downloaded 3 times
Description Spinus pinus, Spinus atriceps and Spinus notatus haplotype alignment; glyceraldehyde-3-phosphate dehydrogenase (GAPDH) gene, partial intron 11
Download pisi gapdh ph haps.fas (2.792 Kb)
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Title BRM15 haplotype alignemt of the pine siskin and black-capped siskin complex
Downloaded 3 times
Description Spinus pinus, Spinus atriceps and Spinus notatus haplotype alignment; brahma protein (BRM) gene, intron 15
Download pisi brm ph haps.fas (2.709 Kb)
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Title ALDOB haplotype alignemt of the pine siskin and black-capped siskin complex
Downloaded 4 times
Description Spinus pinus, Spinus atriceps and Spinus notatus haplotype alignment;aldolase B fructose-bisphosphate (ALDOB) gene, exons 5 and 6, partial cds.
Download pisi aldo ph haps.fas (7.352 Kb)
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When using this data, please cite the original publication:

Alvarez S, Salter JF, McCormack JE, Milá B (2016) Speciation in mountain refugia: phylogeography and demographic history of the pine siskin and black-capped siskin complex. Journal of Avian Biology 47(3): 335–345. http://dx.doi.org/10.1111/jav.00814

Additionally, please cite the Dryad data package:

Alvarez S, Salter JF, McCormack JE, Milá B (2015) Data from: Speciation in mountain refugia: phylogeography and demographic history of the pine siskin and black-capped siskin complex. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.dd3qs
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