Data from: Incorporating abundance information and guiding variable selection for climate-based ensemble forecasting of species' distributional shifts

Tanner EP, Papes M, Elmore RD, Fuhlendorf SD, Davis CA

Date Published: September 21, 2017

DOI: https://doi.org/10.5061/dryad.df564

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Title GAQU_Current_Thresholds_PLOS
Downloaded 6 times
Description A ZIP file of 32 discrete TIFF layers indicating the current areas of environmental suitability for Gambel's quail based on Maxent modeling.
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Title GAQU_Future_Thresholds_PLOS
Downloaded 5 times
Description A ZIP file of 32 discrete TIFF layers indicating the future areas of environmental suitability for Gambel's quail based on Maxent modeling.
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Title MONQ_Current_Thresholds
Downloaded 4 times
Description A ZIP file of 32 discrete TIFF layers indicating the current areas of environmental suitability for Montezuma quail based on Maxent modeling.
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Title MONQ_Future_Thresholds
Downloaded 4 times
Description A ZIP file of 32 discrete TIFF layers indicating the future areas of environmental suitability for Montezuma quail based on Maxent modeling.
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Title MOUQ_Current_Thresholds_PLOS
Downloaded 4 times
Description A ZIP file of 32 discrete TIFF layers indicating the current areas of environmental suitability for mountain quail based on Maxent modeling.
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Title MOUQ_Future_Thresholds_PLOS
Downloaded 3 times
Description A ZIP file of 32 discrete TIFF layers indicating the future areas of environmental suitability for mountain quail based on Maxent modeling.
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Title CAQU_Current_Thresholds_PLOS
Downloaded 5 times
Description A ZIP file of 32 discrete TIFF layers indicating the current areas of environmental suitability for California quail based on Maxent modeling.
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Title CAQU_Future_Thresholds_PLOS
Downloaded 3 times
Description A ZIP file of 32 discrete TIFF layers indicating the future areas of environmental suitability for California quail based on Maxent modeling.
Download CAQU_Future_Thresholds_PLOS.zip (2.273 Mb)
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Title NOBO_Current_Thresholds
Downloaded 4 times
Description A ZIP file of 32 discrete TIFF layers indicating the current areas of environmental suitability for northern bobwhite based on Maxent modeling.
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Title NOBO_Future_Thresholds
Downloaded 4 times
Description A ZIP file of 32 discrete TIFF layers indicating the future areas of environmental suitability for northern bobwhite based on Maxent modeling.
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Title SCQU_Current_Thresholds_PLOS
Downloaded 2 times
Description A ZIP file of 32 discrete TIFF layers indicating the current areas of environmental suitability for scaled quail based on Maxent modeling.
Download SCQU_Current_Thresholds_PLOS.zip (360.1 Kb)
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Title SCQU_Future_Thresholds_PLOS
Downloaded 4 times
Description A ZIP file of 32 discrete TIFF layers indicating the future areas of environmental suitability for scaled quail based on Maxent modeling.
Download SCQU_Future_Thresholds_PLOS.zip (2.173 Mb)
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Title CAQU_MPM
Downloaded 5 times
Description Model performance metrics (AUC, test omission, and standardized test omission) for traditional (correlation/variable contribution [T]), biological (B), and five random (R1-R5) variable suites used to model the climatic niche of the California quail in Maxent. Ecological niche models were estimated across 100 replicates for each variable suite.
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Title GAQU_MPM
Downloaded 4 times
Description Model performance metrics (AUC, test omission, and standardized test omission) for traditional (correlation/variable contribution [T]), biological (B), and five random (R1-R5) variable suites used to model the climatic niche of the Gambel's quail in Maxent. Ecological niche models were estimated across 100 replicates for each variable suite.
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Title MONQ_MPM
Downloaded 5 times
Description Model performance metrics (AUC, test omission, and standardized test omission) for traditional (correlation/variable contribution [T]), biological (B), and five random (R1-R5) variable suites used to model the climatic niche of the Montezuma quail in Maxent. Ecological niche models were estimated across 100 replicates for each variable suite.
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Title MOUQ_MPM
Downloaded 4 times
Description Model performance metrics (AUC, test omission, and standardized test omission) for traditional (correlation/variable contribution [T]), biological (B), and five random (R1-R5) variable suites used to model the climatic niche of the mountain quail in Maxent. Ecological niche models were estimated across 100 replicates for each variable suite.
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Title NOBO_MPM
Downloaded 4 times
Description Model performance metrics (AUC, test omission, and standardized test omission) for traditional (correlation/variable contribution [T]), biological (B), and five random (R1-R5) variable suites used to model the climatic niche of the northern bobwhite in Maxent. Ecological niche models were estimated across 100 replicates for each variable suite.
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Title SCQU_MPM
Downloaded 5 times
Description Model performance metrics (AUC, test omission, and standardized test omission) for traditional (correlation/variable contribution [T]), biological (B), and five random (R1-R5) variable suites used to model the climatic niche of the scaled quail in Maxent. Ecological niche models were estimated across 100 replicates for each variable suite.
Download SCQU_MPM.xlsx (25.56 Kb)
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Title CAQU_REG
Downloaded 4 times
Description Test omission errors for ecological niche models estimated for the California quail in which regularization multiplier values varied. Models were built based on the selection of the best variable suite (traditional [correlation/variable contribution], biological, or random) in Maxent. Ecological niche models were estimated across 100 replicates for each regularization multiplier value.
Download CAQU_REG.xlsx (18.29 Kb)
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Title GAQU_REG
Downloaded 4 times
Description Test omission errors for ecological niche models estimated for the Gambel's quail in which regularization multiplier values varied. Models were built based on the selection of the best variable suite (traditional [correlation/variable contribution], biological, or random) in Maxent. Ecological niche models were estimated across 100 replicates for each regularization multiplier value.
Download GAQU_REG.xlsx (18.17 Kb)
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Title MONQ_REG
Downloaded 4 times
Description Test omission errors for ecological niche models estimated for the Montezuma quail in which regularization multiplier values varied. Models were built based on the selection of the best variable suite (traditional [correlation/variable contribution], biological, or random) in Maxent. Ecological niche models were estimated across 100 replicates for each regularization multiplier value.
Download MONQ_REG.xlsx (17.41 Kb)
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Title MOUQ_REG
Downloaded 4 times
Description Test omission errors for ecological niche models estimated for the mountain quail in which regularization multiplier values varied. Models were built based on the selection of the best variable suite (traditional [correlation/variable contribution], biological, or random) in Maxent. Ecological niche models were estimated across 100 replicates for each regularization multiplier value.
Download MOUQ_REG.xlsx (18.15 Kb)
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Title NOBO_REG
Downloaded 5 times
Description Test omission errors for ecological niche models estimated for the northern bobwhite in which regularization multiplier values varied. Models were built based on the selection of the best variable suite (traditional [correlation/variable contribution], biological, or random) in Maxent. Ecological niche models were estimated across 100 replicates for each regularization multiplier value.
Download NOBO_REG.xlsx (18.66 Kb)
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Title SCQU_REG
Downloaded 3 times
Description Test omission errors for ecological niche models estimated for the scaled quail in which regularization multiplier values varied. Models were built based on the selection of the best variable suite (traditional [correlation/variable contribution], biological, or random) in Maxent. Ecological niche models were estimated across 100 replicates for each regularization multiplier value.
Download SCQU_REG.xlsx (18.16 Kb)
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Title maxentResultsCAQU
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Description Maxent output (excel file) for ecological niche models of the California quail estimated from the best variable suite and top performing regularization multiplier.
Download maxentResultsCAQU.csv (66.08 Kb)
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Title maxentResultsMONQ
Downloaded 4 times
Description Maxent output (excel file) for ecological niche models of the Montezuma quail estimated from the best variable suite and top performing regularization multiplier.
Download maxentResultsMONQ.csv (79.44 Kb)
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Title maxentResultsGAQU
Downloaded 3 times
Description Maxent output (excel file) for ecological niche models of the Gambel's quail estimated from the best variable suite and top performing regularization multiplier.
Download maxentResultsGAQU.csv (64.98 Kb)
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Title maxentResultsMOUQ
Downloaded 3 times
Description Maxent output (excel file) for ecological niche models of the mountain quail estimated from the best variable suite and top performing regularization multiplier.
Download maxentResultsMOUQ.csv (67.39 Kb)
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Title maxentResultsNOBO
Downloaded 4 times
Description Maxent output (excel file) for ecological niche models of the northern bobwhite estimated from the best variable suite and top performing regularization multiplier.
Download maxentResultsNOBO.csv (82.35 Kb)
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Title maxentResultsSCQU
Downloaded 4 times
Description Maxent output (excel file) for ecological niche models of the scaled quail estimated from the best variable suite and top performing regularization multiplier.
Download maxentResultsSCQU.csv (66.84 Kb)
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Title caqu_bbs_a
Downloaded 4 times
Description Raster file of California quail abundance estimates derived from Breeding Bird Survey (BBS) data.
Download caqu_bbs_a.zip (15.10 Kb)
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Title gaqu_bbs_a
Downloaded 3 times
Description Raster file of Gambel's quail abundance estimates derived from Breeding Bird Survey (BBS) data.
Download gaqu_bbs_a.zip (9.028 Kb)
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Title mouq_bbs_a
Downloaded 3 times
Description Raster file of mountain quail abundance estimates derived from Breeding Bird Survey (BBS) data.
Download mouq_bbs_a.zip (7.952 Kb)
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Title nobo_bbs_a
Downloaded 4 times
Description Raster file of northern bobwhite abundance estimates derived from Breeding Bird Survey (BBS) data.
Download nobo_bbs_a.zip (40.65 Kb)
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Title scqu_bbs_a
Downloaded 5 times
Description Raster file of scaled quail abundance estimates derived from Breeding Bird Survey (BBS) data.
Download scqu_bbs_a.zip (10.88 Kb)
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Title caqumaxenteapnatureserve
Downloaded 2 times
Description Collated and spatially rarefied occurrence locations of California quail used to create ecological niche models through Maxent. Data were collated from both Breeding Bird Survey and eBird databases.
Download caqumaxenteapnatureserve.csv (10.33 Kb)
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Title gaqumaxenteapnatureserve
Downloaded 3 times
Description Collated and spatially rarefied occurrence locations of Gambel's quail used to create ecological niche models through Maxent. Data were collated from both Breeding Bird Survey and eBird databases.
Download gaqumaxenteapnatureserve.csv (8.383 Kb)
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Title monq_maxentEAP
Downloaded 3 times
Description Collated and spatially rarefied occurrence locations of Montezuma quail used to create ecological niche models through Maxent. Data were collated from both Breeding Bird Survey and eBird databases.
Download monq_maxentEAP.csv (1.038 Kb)
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Title mouq_maxentfileEAP
Downloaded 2 times
Description Collated and spatially rarefied occurrence locations of mountain quail used to create ecological niche models through Maxent. Data were collated from both Breeding Bird Survey and eBird databases.
Download mouq_maxentfileEAP.csv (6.944 Kb)
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Title nobomaxenteapnatureserve
Downloaded 4 times
Description Collated and spatially rarefied occurrence locations of northern bobwhite used to create ecological niche models through Maxent. Data were collated from both Breeding Bird Survey and eBird databases.
Download nobomaxenteapnatureserve.csv (61.67 Kb)
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Title scqu_maxentfileeap
Downloaded 3 times
Description Collated and spatially rarefied occurrence locations of scaled quail used to create ecological niche models through Maxent. Data were collated from both Breeding Bird Survey and eBird databases.
Download scqu_maxentfileeap.csv (9.918 Kb)
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When using this data, please cite the original publication:

Tanner EP, Papeş M, Elmore RD, Fuhlendorf SD, Davis CA (2017) Incorporating abundance information and guiding variable selection for climate-based ensemble forecasting of species' distributional shifts. PLOS ONE 12(9): e0184316. https://doi.org/10.1371/journal.pone.0184316

Additionally, please cite the Dryad data package:

Tanner EP, Papes M, Elmore RD, Fuhlendorf SD, Davis CA (2017) Data from: Incorporating abundance information and guiding variable selection for climate-based ensemble forecasting of species' distributional shifts. Dryad Digital Repository. https://doi.org/10.5061/dryad.df564
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