Data from: Sequencing of the needle transcriptome from Norway spruce (Picea abies Karst L.) reveals lower substitution rates, but similar selective constraints in gymnosperms and angiosperms

Chen J, Uebbing S, Gyllenstrand N, Lagercrantz U, Lascoux M, Källman T

Date Published: November 5, 2012

DOI: http://dx.doi.org/10.5061/dryad.ds2gp

 

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Title Picea abies needle transcripts
Downloaded 68 times
Description de novo assembly of Picea abies needle transcripts sequenced using mRNA-seq technology
Download pa_tgicl95_151.fa (19.61 Mb)
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Title SNP file
Downloaded 82 times
Description This file describes the single nucleotide polymorphism position, reference and alternative phases in each transcripts.
Download snp_filterQ60AF25.txt (551.3 Kb)
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Title PAML tables
Downloaded 115 times
Description It includes six tables that describe information of orthologous sequences used in pairwise PAML analysis when calculating Ka/Ks ratios.
Download PAML_tables.zip (827.1 Kb)
Download README.txt (486 bytes)
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When using this data, please cite the original publication:

Chen J, Uebbing S, Gyllenstrand N, Lagercrantz U, Lascoux M, Källman T (2012) Sequencing of the needle transcriptome from Norway spruce (Picea abies Karst L.) reveals lower substitution rates, but similar selective constraints in gymnosperms and angiosperms. BMC Genomics 13: 589. http://dx.doi.org/10.1186/1471-2164-13-589

Additionally, please cite the Dryad data package:

Chen J, Uebbing S, Gyllenstrand N, Lagercrantz U, Lascoux M, Källman T (2012) Data from: Sequencing of the needle transcriptome from Norway spruce (Picea abies Karst L.) reveals lower substitution rates, but similar selective constraints in gymnosperms and angiosperms. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.ds2gp
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