Data from: Relative contributions of neutral and non-neutral genetic differentiation to inform conservation of steelhead trout across highly variable landscapes

Matala AP, Ackerman MW, Campbell MR, Narum SR

Date Published: May 16, 2014

DOI: http://dx.doi.org/10.5061/dryad.ds6c4

 

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Title Columbia River steelhead trout SNP data
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Description These data are genotypes for biallelic SNPs (two alleles). Data is formatted for the program GENALEX: (Peakall, R., and P. E. Smouse. 2006. GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Molecular Ecology Notes 6, 288-295. Program note available from: http://www.blackwell-synergy.com/doi/abs/10.1111/j.1471-8286.2005.01155.x). The first row in the file contains: #loci, total#samples, #populations, and #samples/population. Row two has the data set title in column A, followed by two empty cells, then the name or designation of each population beginning in column D. In row three, column A is the header “sample ID” followed by “popID” in column B, and then a list of locus names. Between each locus name is an empty cell (every other column). Raw genotypic data begins on row four, column C. Individuals are sequential in column A, and genotypes for 180 SNP are in columns C-MX. Each three digit allele appears in its own column. Populations designations, POP1-POP145 correspond with population reference numbers in the manuscript supplemental 1.
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When using this data, please cite the original publication:

Matala AP, Ackerman MW, Campbell MR, Narum SR (2014) Relative contributions of neutral and non-neutral genetic differentiation to inform conservation of steelhead trout across highly variable landscapes. Evolutionary Applications 7(6): 682–701. http://dx.doi.org/10.1111/eva.12174

Additionally, please cite the Dryad data package:

Matala AP, Ackerman MW, Campbell MR, Narum SR (2014) Data from: Relative contributions of neutral and non-neutral genetic differentiation to inform conservation of steelhead trout across highly variable landscapes. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.ds6c4
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