Data from: Development of a Nasonia vitripennis outbred laboratory population for genetic analysis

 

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Title HVRx_VarScan_output_Chr1.vcf
Downloaded 20 times
Description Nasonia vitripennis HVRx outbred laboratory population SNP data - Chromosome 1. VarScan.v2.2.8 output according to the following rules: minimum consensus quality: 20; minimum count of minor allele: 2, minimum coverage: 8. Reads with mapping qualities less than 20 were discarded.
Download HVRx_VarScan_output_Chr1.vcf.out (6.600 Mb)
Download README.txt (1.1 Kb)
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Title HVRx_VarScan_output_Chr2.vcf
Downloaded 13 times
Description Nasonia vitripennis HVRx outbred laboratory population SNP data - Chromosome 2. VarScan.v2.2.8 output according to the following rules: minimum consensus quality: 20; minimum count of minor allele: 2, minimum coverage: 8. Reads with mapping qualities less than 20 were discarded.
Download HVRx_VarScan_output_Chr2.vcf.out (6.894 Mb)
Download README.txt (1.1 Kb)
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Title HVRx_VarScan_output_Chr3.vcf
Downloaded 7 times
Description Nasonia vitripennis HVRx outbred laboratory population SNP data - Chromosome 3. VarScan.v2.2.8 output according to the following rules: minimum consensus quality: 20; minimum count of minor allele: 2, minimum coverage: 8. Reads with mapping qualities less than 20 were discarded.
Download HVRx_VarScan_output_Chr3.vcf.out (5.800 Mb)
Download README.txt (1.1 Kb)
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Title HVRx_VarScan_output_Chr4.vcf
Downloaded 5 times
Description Nasonia vitripennis HVRx outbred laboratory population SNP data - Chromosome 4. VarScan.v2.2.8 output according to the following rules: minimum consensus quality: 20; minimum count of minor allele: 2, minimum coverage: 8. Reads with mapping qualities less than 20 were discarded.
Download HVRx_VarScan_output_Chr4.vcf.out (5.525 Mb)
Download README.txt (1.1 Kb)
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Title HVRx_VarScan_output_Chr5.vcf
Downloaded 12 times
Description Nasonia vitripennis HVRx outbred laboratory population SNP data - Chromosome 5. VarScan.v2.2.8 output according to the following rules: minimum consensus quality: 20; minimum count of minor allele: 2, minimum coverage: 8. Reads with mapping qualities less than 20 were discarded.
Download HVRx_VarScan_output_Chr5.vcf.out (5.360 Mb)
Download README.txt (1.1 Kb)
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When using this data, please cite the original publication:

van de Zande L, Ferber S, de Haan A, Beukeboom LW, van Heerwaarden J, Pannebakker BA (2013) Development of a Nasonia vitripennis outbred laboratory population for genetic analysis. Molecular Ecology Resources 14(3): 578–587. http://dx.doi.org/10.1111/1755-0998.12201

Additionally, please cite the Dryad data package:

van de Zande L, Ferber S, de Haan A, Beukeboom LW, van Heerwaarden J, Pannebakker BA (2013) Data from: Development of a Nasonia vitripennis outbred laboratory population for genetic analysis. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.f2330
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