Data from: Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects

Pauli T, Vedder L, Dowling D, Petersen M, Meusemann K, Donath A, Peters RS, Podsiadlowski L, Mayer C, Liu S, Zhou X, Heger P, Wiehe T, Hering L, Mayer G, Misof B, Niehuis O

Date Published: November 3, 2016

DOI: http://dx.doi.org/10.5061/dryad.f4r38

 

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Title Amino acid alignments of insect insulator proteins
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Description This archive contains amino acid alignments of all insect insulator proteins found in the 1KITE transcriptome data and the sequences that were used, to infer profile Hidden Markov Models for this search. The alignments are in the .fasta file format.
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Title Gene trees of insect insulator proteins
Downloaded 2 times
Description This archive contains all gene trees inferred from amino acid alignments of insulator protein sequences that were found in the 1KITE transcriptome data. The gene trees are in the .newick file format.
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Title Nucleotide alignments of insect insulator proteins
Downloaded 3 times
Description This archive contains all nucleotide alignments of insect insulator protein sequences found in the 1KITE project. These alignments have been used to infer dN/dS ratios as markers for positive or negative selection in these sequences. The alignments are in the .fasta file format.
Download insulator_proteins_nucleotide_alignments.tar.gz (386.9 Kb)
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When using this data, please cite the original publication:

Pauli T, Vedder L, Dowling D, Petersen M, Meusemann K, Donath A, Peters RS, Podsiadlowski L, Mayer C, Liu S, Zhou X, Heger P, Wiehe T, Hering L, Mayer G, Misof B, Niehuis O (2016) Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects. BMC Genomics 17: 861. http://dx.doi.org/10.1186/s12864-016-3205-1

Additionally, please cite the Dryad data package:

Pauli T, Vedder L, Dowling D, Petersen M, Meusemann K, Donath A, Peters RS, Podsiadlowski L, Mayer C, Liu S, Zhou X, Heger P, Wiehe T, Hering L, Mayer G, Misof B, Niehuis O (2016) Data from: Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.f4r38
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