Data from: Fine-scale population epigenetic structure in relation to gastro-intestinal parasite load in red grouse (Lagopus lagopus scotica)

Wenzel MA, Piertney SB

Date Published: June 17, 2014

DOI: http://dx.doi.org/10.5061/dryad.f727j

 

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Title Raw presence/absence scores of MSAP bands
Downloaded 27 times
Description This file contains the raw scores of 129 MSAP bands scored across 234 red grouse individuals. Use this file as input for the R package "msap" to do basic methylation analyses.
Download msap_raw_scores.csv (129.2 Kb)
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Title Transformed MSAP scores and morphological data
Downloaded 22 times
Description This file contains 303 epiloci that were generated by transforming 129 MSAP bands into binary loci. The file also provides morphological data in order to do regression analyses.
Download msap_transformed_scores.txt (149.0 Kb)
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Title Nomenclature for MSAP bands and corresponding epiloci
Downloaded 14 times
Description Contains identifiers for each MSAP band and each corresponding epilocus alongside represented methylation state (unmethylated, hemimethylated, fully methylated)
Download locus_ids.txt (6.502 Kb)
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Title Pairwise geographic distances
Downloaded 6 times
Description Contains a matrix with pairwise geographic distances among the 21 study populations.
Download geo_distances.txt (2.473 Kb)
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Title Complete R analysis script
Downloaded 59 times
Description Contains R code for analysing the input files using "msap" and custom logistic regressions.
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Title Readme
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Description Details file contents
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When using this data, please cite the original publication:

Wenzel MA, Piertney SB (2014) Fine-scale population epigenetic structure in relation to gastro-intestinal parasite load in red grouse (Lagopus lagopus scotica). Molecular Ecology 23(17): 4256-4273. http://dx.doi.org/10.1111/mec.12833

Additionally, please cite the Dryad data package:

Wenzel MA, Piertney SB (2014) Data from: Fine-scale population epigenetic structure in relation to gastro-intestinal parasite load in red grouse (Lagopus lagopus scotica). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.f727j
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