Data from: RAD-sequencing reveals within-generation polygenic selection in response to anthropogenic organic and metal contamination in North Atlantic Eels

Laporte M, Pavey SA, Rougeux C, Pierron F, Budzinski H, Lauzent M, Labadie P, Geneste E, Couture P, Baudrimont M, Bernatchez L

Date Published: November 11, 2015

DOI: http://dx.doi.org/10.5061/dryad.g3122

 

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Title A.anguilla_genotypes.tar
Downloaded 18 times
Description genepop file for A.anguilla individuals
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Title A.rostrata_genotypes
Downloaded 15 times
Description Genepop file containing genotype for all A. rostrata individuals
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Title Important_marker_annotation.tar
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Description Annotation results for the important markers.
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Title Markers and Important markers
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Description Genpop files (in a slightly modified format used for the random forest and contaminants work) of all markers for both eel species, in addition to the identification and statistics of important markers, the similarity matrix obtained from these important markers and the PCoAs produced from these similarity matrix.
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Title bayescan
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Title Pollutants
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Description Individual contamination of 24 organic and 10 metal pollutants for both species.
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Title Database link.tar
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Description A csv that links each individual with their BioSample Accession in SRA
Download database link.txt (8.313 Kb)
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When using this data, please cite the original publication:

Laporte M, Pavey SA, Rougeux C, Pierron F, Budzinski H, Lauzent M, Labadie P, Geneste E, Couture P, Baudrimont M, Bernatchez L (2016) RAD-sequencing reveals within-generation polygenic selection in response to anthropogenic organic and metal contamination in North Atlantic Eels. Molecular Ecology 25(1): 219–237. http://dx.doi.org/10.1111/mec.13466

Additionally, please cite the Dryad data package:

Laporte M, Pavey SA, Rougeux C, Pierron F, Budzinski H, Lauzent M, Labadie P, Geneste E, Couture P, Baudrimont M, Bernatchez L (2015) Data from: RAD-sequencing reveals within-generation polygenic selection in response to anthropogenic organic and metal contamination in North Atlantic Eels. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.g3122
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