Data from: Phylogenomic reconstruction of sportive lemurs (genus Lepilemur) recovered from mitogenomes with inferences for Madagascar biogeography

Lei R, Frasier CL, Hawkins MTR, Engberg SE, Bailey CA, Johnson SE, McLain AT, Groves CP, Perry GH, Nash SD, Mittermeier RA, Louis JEE

Date Published: September 22, 2016

DOI: http://dx.doi.org/10.5061/dryad.g4760

 

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Title lepitotalm23.phy
Downloaded 11 times
Description The phylip alignment file of complete mitochondrial genome sequences from 36 sportive lemur individuals with 15 outgroup taxa with total alignment of 14755
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Title lepitotalm23RAxML_bestTree
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Description The best tree generated from Lepitotal23.phy by RAxML.
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Title lepitotalm23Beast
Downloaded 5 times
Description Mitogenome BEAST xml file from this publication
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Title lepitotalm23nhmpannotationtreefromBeast
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Description The Bayesian tree with divergence time from lepitotalm23Beast.xml by BEAST package
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Title Lepitotalm23BestSchemefromPartitionFinderV1.10
Downloaded 3 times
Description The best partition Scheme from PartitionFinderV1.10
Download Lepitotalm23BestSchemefromPartitionFinderV1.10.txt (5.083 Kb)
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Title lepitotalm23MrsBayes
Downloaded 9 times
Description The alignment and setting for Mrbayes bayesian analyses
Download lepitotalm23MrsBayes.nex (756.5 Kb)
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Title Lepitotalm23Mrbayes_consustree
Downloaded 5 times
Description The consensus tree by Mrbayes
Download Lepitotalm23Mrbayes_consustree.nwk (2.544 Kb)
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When using this data, please cite the original publication:

Lei R, Frasier CL, Hawkins MTR, Engberg SE, Bailey CA, Johnson SE, McLain AT, Groves CP, Perry GH, Nash SD, Mittermeier RA, Louis EE (2017) Phylogenomic reconstruction of sportive lemurs (genus Lepilemur) recovered from mitogenomes with inferences for Madagascar biogeography. Journal of Heredity 108(2): 107-119. http://dx.doi.org/10.1093/jhered/esw072

Additionally, please cite the Dryad data package:

Lei R, Frasier CL, Hawkins MTR, Engberg SE, Bailey CA, Johnson SE, McLain AT, Groves CP, Perry GH, Nash SD, Mittermeier RA, Louis JEE (2016) Data from: Phylogenomic reconstruction of sportive lemurs (genus Lepilemur) recovered from mitogenomes with inferences for Madagascar biogeography. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.g4760
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