Data from: What, if anything, are hybrids: enduring truths and challenges associated with population structure and gene flow

Gompert Z, Buerkle CA

Date Published: March 8, 2016

DOI: http://dx.doi.org/10.5061/dryad.g7g45

 

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Title R script to simulate hybrids
Downloaded 15 times
Description We used this R script to simulate hybrids for the second section of the paper ("what if anything are hybrids"). It includes code to extract ancestry data, perform PCA, and generate plots.
Download sims.R (13.18 Kb)
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Title nemo initialization files
Downloaded 14 times
Description Initialization files for nemo simulations. *ini files are provided for the different sets of simulations run for the paper. The *freq.txt files provide starting allele frequencies for the simulations, and the shell script runNemo.sh runs the sets of simulations.
Download nemo_init.tar.gz (9.994 Kb)
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When using this data, please cite the original publication:

Gompert Z, Buerkle CA (2016) What, if anything, are hybrids: enduring truths and challenges associated with population structure and gene flow. Evolutionary Applications 9(7): 909-923. http://dx.doi.org/10.1111/eva.12380

Additionally, please cite the Dryad data package:

Gompert Z, Buerkle CA (2016) Data from: What, if anything, are hybrids: enduring truths and challenges associated with population structure and gene flow. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.g7g45
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