Data from: Parasitism drives host genome evolution: insights from the Pasteuria ramosa - Daphnia magna system

Bourgeois Y, Roulin AC, Muller K, Ebert D

Date Published: February 21, 2017

DOI: http://dx.doi.org/10.5061/dryad.g89m1

 

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Title SNPs called with freebayes
Downloaded 6 times
Description This VCF contains the filtered SNPs for studying selection and association with resistance phenotypes in european D. magna populations.
Download Input_vcf.recode.vcf (27.92 Mb)
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Title Supplementary SNPs obtained from Sanger sequencing
Downloaded 5 times
Description These SNPs were originally part of a sequencing effort to detect association with ephippia production (Roulin et al. 2016, MBE). They were included in the final analysis (total of 7034 SNPs)
Download scaffold1036_supp.vcf (36.97 Kb)
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Title Resistotypes
Downloaded 4 times
Description This file contains the resistotypes for clones included in the association study (R: resistant ; S: susceptible)
Download Resistotypes.xlsx (10.33 Kb)
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When using this data, please cite the original publication:

Bourgeois Y, Roulin AC, Muller K, Ebert D (2017) Parasitism drives host genome evolution: insights from the Pasteuria ramosa - Daphnia magna system. Evolution 71(4): 1106–1113. http://dx.doi.org/10.1111/evo.13209

Additionally, please cite the Dryad data package:

Bourgeois Y, Roulin AC, Muller K, Ebert D (2017) Data from: Parasitism drives host genome evolution: insights from the Pasteuria ramosa - Daphnia magna system. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.g89m1
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