Data from: Quantitative trait loci for growth and body size in the nine-spined stickleback Pungitius pungitius L.

 

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Title Genotype input file for GridQTL
Downloaded 19 times
Description Genotypes of 226 microsatellite markers used in GridQTL analyses. Line 1: Number of markers Line 2: List of names of the markers Line 3: Names given to each of the generations. Line 4: Names given to males and females. Line 5: Symbol or symbols for missing genotype data. Line 6 on Data for each individual in turn. Contains in order: Individual ID Sire ID Dam ID Sex Line or generation Marker genotypes
Download GENOTYPES.txt (511.6 Kb)
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Title Map input file for GridQTL
Downloaded 15 times
Description The linkage map, obtained from Crimap, of nine-spined stickleback for GridQTL analyses. Line 1: Number of chromosomes Line 2: Interval for calculation of genotype probabilities and coefficients in cM. Line 3: Name of first chromosome, number of markers on first chromosome and whether map is same for two sexes (=1) or not (=2). Line 4: For first linkage group, marker names in order separated by distances between them in cM.
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Title Phenotype input file for GridQTL
Downloaded 21 times
Description Body size and growth measurements in nine-spined sticklebacks for QTL mapping analyses in GridQTL. Line 1: Numbers of fixed effects (factors), covariates and traits, respectively Line 2: Name of each fixed effect, covariate and trait. Line 3: Code for missing trait value Line 4 : Individual ID and values for fixed effects, covariates and traits for that individual.
Download PHENOTYPES_size.txt (42.91 Kb)
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When using this data, please cite the original publication:

Laine VN, Shikano T, Herczeg G, Vilkki J, Merilä J (2013) Quantitative trait loci for growth and body size in the nine-spined stickleback Pungitius pungitius L. Molecular Ecology 22(23): 5861–5876. http://dx.doi.org/10.1111/mec.12526

Additionally, please cite the Dryad data package:

Laine VN, Shikano T, Herczeg G, Vilkki J, Merilä J (2013) Data from: Quantitative trait loci for growth and body size in the nine-spined stickleback Pungitius pungitius L. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.gf7b0
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