Data from: Transcriptome dynamics over a lunar month in a broadcast spawning Acroporid coral

Oldach MJ, Workentine M, Matz MV, Fan T, Vize PD

Date Published: January 17, 2017

DOI: http://dx.doi.org/10.5061/dryad.gk1qk

 

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Title Table mapping transcriptome sequence to isogroup ID
Downloaded 6 times
Description This file maps the A. millepora sequence name to the isogroup number and also includes the sequence. Generated by Matz lab.
Download transcriptome_seq2iso.tab (29.10 Mb)
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Title amil.fasta
Downloaded 8 times
Description The A. millepora transcriptome used for alignments in this study. This is based on the transcriptome of Moya et al. (PMID 22490231) modified by the Matz lab.
Download amil.fasta.gz (22.99 Mb)
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Title NormalizedCount-lab-labels
Downloaded 10 times
Description Normalized read counts generated by DESeq2 LRT analysis
Download NormalizedCount-lab-labels.csv (10.46 Mb)
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Title LRT_Updated GO annotations
Downloaded 15 times
Description Updated GO annotations for the 55 genes identified via LRT
Download LRT_B2G.txt (7.128 Mb)
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Title GLM new GO annotations
Downloaded 6 times
Description Blast2GO updates of annotations for DE genes detected by GLM
Download GLM new annotations.txt (105.7 Kb)
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Title salmon_count_table
Downloaded 12 times
Description Read count table from Salmon light-weight alignment
Download salmon_count_table.txt (1.621 Mb)
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When using this data, please cite the original publication:

Oldach MJ, Workentine M, Matz MV, Fan T, Vize PD (2017) Transcriptome dynamics over a lunar month in a broadcast spawning Acroporid coral. Molecular Ecology 26(9): 2514–2526. http://dx.doi.org/10.1111/mec.14043

Additionally, please cite the Dryad data package:

Oldach MJ, Workentine M, Matz MV, Fan T, Vize PD (2017) Data from: Transcriptome dynamics over a lunar month in a broadcast spawning Acroporid coral. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.gk1qk
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