Data from: De novo transcriptome assembly and polymorphism detection in two highly divergent evolutionary units of Bosca's newt (Lissotriton boscai) endemic to the Iberian Peninsula

Nourisson C, Muñoz-Merida A, Carneiro M, Sequeira F

Date Published: November 3, 2016

DOI: http://dx.doi.org/10.5061/dryad.gp5j0

 

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Title boscai_spain_contigs
Downloaded 9 times
Description Contigs generated by Trinity assembler from all the reads belonging to boscai from Spain
Download boscai_spain.fasta (125.3 Mb)
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Title boscai_portugal_contigs
Downloaded 9 times
Description Contigs generated by Trinity assembler from all the reads belonging to boscai from Portugal.
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Title boscai_spain_annotation
Downloaded 5 times
Description Annotations generated by Sma3s software for contigs belonging to boscai from Spain
Download boscai_spain.annot (38.52 Mb)
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Title boscai_portugal_annotation
Downloaded 6 times
Description Annotations generated by Sma3s software for contigs belonging to boscai from Portugal
Download boscai_portugal.annot (38.18 Mb)
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Title SNPs_fixed
Downloaded 10 times
Description SNPs fixed in boscai from Portugal and Spain
Download filterDP10MQ20_fix.vcf (36.28 Mb)
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Title SNPs_exclusive_in_boscai_portugal
Downloaded 4 times
Description Exclusive SNPs in boscai from Portugal
Download filterDP10MQ20_polpor.vcf (30.63 Mb)
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Title SNPs_exclusive_in_boscai_spain
Downloaded 10 times
Description Exclusive SNPs in boscai from Spain
Download filterDP10MQ20_polsp.vcf (25.41 Mb)
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Title SNPs_shared_between_boscai_portugal_and_boscai_spain
Downloaded 5 times
Description SNPs shared between boscai from Portugal and boscai from Spain
Download filterDP10MQ20_shared.vcf (24.64 Mb)
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When using this data, please cite the original publication:

Nourisson C, Muñoz-Merida A, Carneiro M, Sequeira F (2017) De novo transcriptome assembly and polymorphism detection in two highly divergent evolutionary units of Bosca's newt (Lissotriton boscai) endemic to the Iberian Peninsula. Molecular Ecology Resources 17(3): 546–549. http://dx.doi.org/10.1111/1755-0998.12563

Additionally, please cite the Dryad data package:

Nourisson C, Muñoz-Merida A, Carneiro M, Sequeira F (2017) Data from: De novo transcriptome assembly and polymorphism detection in two highly divergent evolutionary units of Bosca's newt (Lissotriton boscai) endemic to the Iberian Peninsula. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.gp5j0
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