Data from: Population genomics reveals additive and replacing horizontal gene transfers in the emerging pathogen Dickeya solani

Khayi S, Blin P, Pédron J, Chong T, Chan K, Moumni M, Hélias V, Van Gijsegem F, Faure D

Date Published: September 12, 2015

DOI: http://dx.doi.org/10.5061/dryad.h26hs

 

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Title Figure 1
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Description This is the alignment of the sequences used for the MLSA analysis, these sequences are generated by concatenating 11 housekeeping genes as described in the publication. the and the tree alignment were performed using MEGA 6 software.
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Title Figure 4
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Description This file contains the alignments and trees generated using MEGA6. the trees are presented in the figure 4 in the publication.
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Title Figures 5_6_7
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Description these are the alignments of the sequences genes (amN, oppF, oppB, dnaJ, dnaK, mogA, norF, norR and fumA) used to generate trees that are presented in the figures 5, 6 and 7 in the publication. we have used MEGA6 to perform alignments.
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When using this data, please cite the original publication:

Khayi S, Blin P, Pédron J, Chong T, Chan K, Moumni M, Hélias V, Van Gijsegem F, Faure D (2015) Population genomics reveals additive and replacing horizontal gene transfers in the emerging pathogen Dickeya solani. BMC Genomics 16: 788. http://dx.doi.org/10.1186/s12864-015-1997-z

Additionally, please cite the Dryad data package:

Khayi S, Blin P, Pédron J, Chong T, Chan K, Moumni M, Hélias V, Van Gijsegem F, Faure D (2015) Data from: Population genomics reveals additive and replacing horizontal gene transfers in the emerging pathogen Dickeya solani. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.h26hs
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