Data from: Extracting spatio-temporal patterns in animal trajectories: an ecological application of sequence analysis methods

De Groeve J, Van de Weghe N, Ranc N, Neutens T, Ometto L, Rota-Stabelli O, Cagnacci F

Date Published: August 11, 2015

DOI: http://dx.doi.org/10.5061/dryad.h4f7p

 

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Title Real and simulated habitat use sequences
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Description This dataset contains simulated and real bimonthly spatio-temporal habitat use sequences, distinguishing four habitat use classes (high-closed, 4; high-open, 3; low-closed, 2; low-open,1). Simulated sequences represent four patterns of habitat selection (alternating, random, open, closed) and were simulated in 9 different landscapes with different proportions of availability of open and closed habitats (10-90% open, each saved as a separate csv-file, e.g. Movement_random_10_open_alternance.csv). The real sequences (data_real.csv) give the bimonthly sequential habitat use for 26 roe deer, in total consisting of 111 sequences. Also several variables were associated to the real sequences (e.g. animal, sex, age, migration, home range size, proportion of closed, season). In this dataset we also provide the raw correlation matrices (e.g. Open_10_) for each of the nine landscapes, which were used as input for the substitution weight matrices.
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When using this data, please cite the original publication:

De Groeve J, Van de Weghe N, Ranc N, Neutens T, Ometto L, Rota-Stabelli O, Cagnacci F (2016) Extracting spatio-temporal patterns in animal trajectories: an ecological application of sequence analysis methods. Methods in Ecology and Evolution 7(3): 369–379. http://dx.doi.org/10.1111/2041-210X.12453

Additionally, please cite the Dryad data package:

De Groeve J, Van de Weghe N, Ranc N, Neutens T, Ometto L, Rota-Stabelli O, Cagnacci F (2015) Data from: Extracting spatio-temporal patterns in animal trajectories: an ecological application of sequence analysis methods. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.h4f7p
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