Data from: Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomes

Sun J, Zhang Y, Xu T, Zhang Y, Mu H, Zhang Y, Lan Y, Fields CJ, Hui JHL, Zhang W, Li R, Nong W, Cheung FKM, Qiu J, Qian P

Date Published: April 4, 2017

DOI: http://dx.doi.org/10.5061/dryad.h9942

 

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Title The assembled genomic scaffolds of Bathymodiolus platifrons
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Title The assembled genomic scaffolds of Modiolus philippinarum
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Title Bathymodiolus platifrons genome annotation file (gff3 format)
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Title Modiolus philippinarum genome annotation file (gff3 format)
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Title The predicted transcript sequences of the MAKER v3.0 annotations for the genome of Bathymodiolus platifrons (fasta format)
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Title The predicted protein sequences of the MAKER v3.0 annotations for the genome of Bathymodiolus platifrons (fasta format)
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Title The predicted transcript sequences of the MAKER v3.0 annotations for the genome of Modiolus philippinarum (fasta format)
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Title The predicted protein sequences of the MAKER v3.0 annotations for the genome of Modiolus philippinarum (fasta format)
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Title The functional annotation and gene expression level file of the predicted Bathymodiolus platifrons gene models
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Description Abbreviations used in this excel table: tpm, Transcripts Per Kilobase Million; AM, adductor muscle; F, foot; O, ovary; G, gill; M, mantle; and VM, visceral mass.
Download Bathymodiolus_FunAnno_FilteredGeneModels.xlsx (6.697 Mb)
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Title The functional annotation and gene expression level file of the predicted Modiolus philippinarum gene models
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Description Abbreviations used in this excel table: tpm, Transcripts Per Kilobase Million; AM, adductor muscle; F, foot; G, gill; M, mantle; and VM, visceral mass.
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When using this data, please cite the original publication:

Sun J, Zhang Y, Xu T, Zhang Y, Mu H, Zhang Y, Lan Y, Fields CJ, Hui JHL, Zhang W, Li R, Nong W, Cheung FKM, Qiu J, Qian P (2017) Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomes. Nature Ecology & Evolution 1: 0121. http://dx.doi.org/10.1038/s41559-017-0121

Additionally, please cite the Dryad data package:

Sun J, Zhang Y, Xu T, Zhang Y, Mu H, Zhang Y, Lan Y, Fields CJ, Hui JHL, Zhang W, Li R, Nong W, Cheung FKM, Qiu J, Qian P (2017) Data from: Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomes. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.h9942
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