Data from: Phylogenetic relationships and timing of diversification in gonorynchiform fishes inferred using nuclear gene DNA sequences (Teleostei: Ostariophysi)

Near TJ, Dornburg A, Friedman M

Date Published: August 5, 2014

DOI: http://dx.doi.org/10.5061/dryad.hb653

 

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Title gonorynchALL
Downloaded 16 times
Description interleaved alignment of all 9 nuclear genes in nexus format
Download gonorynchALL.nex (149.4 Kb)
Download README.txt (837 bytes)
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Title gonorynchENC
Downloaded 5 times
Description alignment of ENC1 nuclear gene in nexus format
Download gonorynchENC.nex (13.57 Kb)
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Title gonorynchGLYT
Downloaded 8 times
Description alignment of Glyt nuclear gene in nexus format
Download gonorynchGLYT.nex (15.65 Kb)
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Title gonorynchMYH
Downloaded 6 times
Description alignment of myh6 nuclear gene in nexus format
Download gonorynchMYH.nex (15.46 Kb)
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Title gonorynchPLAG
Downloaded 6 times
Description alignment of plagl2 nuclear gene in nexus format
Download gonorynchPLAG.nex (14.13 Kb)
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Title gonorynchPTR
Downloaded 7 times
Description alignment of Ptr nuclear gene in nexus format
Download gonorynchPTR.nex (13.98 Kb)
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Title gonorynchRAG
Downloaded 6 times
Description alignment of rag1 nuclear gene in nexus format
Download gonorynchRAG.nex (26.89 Kb)
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Title gonorynchSH3
Downloaded 5 times
Description alignment of SH3PX3 nuclear gene in nexus format
Download gonorynchSH3.nex (11.89 Kb)
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Title gonorynchTBR
Downloaded 5 times
Description alignment of tbr1 nuclear gene in nexus format
Download gonorynchTBR.nex (12.37 Kb)
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Title gonorynchZIC
Downloaded 9 times
Description alignment of zic1 nuclear gene in nexus format
Download gonorynchZIC.nex (16.30 Kb)
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Title gonorynchTOT
Downloaded 13 times
Description interleaved alignment of all 9 nuclear genes and morphological data in nexus format
Download gonorynchTOT.nex (176.6 Kb)
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Title gonorynchTIPa
Downloaded 14 times
Description BEAST input file for divergence time estimation
Download gonorynchTIPa.xml (296.2 Kb)
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When using this data, please cite the original publication:

Near TJ, Dornburg A, Friedman M (2014) Phylogenetic relationships and timing of diversification in gonorynchiform fishes inferred using nuclear gene DNA sequences (Teleostei: Ostariophysi). Molecular Phylogenetics and Evolution 80: 297–307. http://dx.doi.org/10.1016/j.ympev.2014.07.013

Additionally, please cite the Dryad data package:

Near TJ, Dornburg A, Friedman M (2014) Data from: Phylogenetic relationships and timing of diversification in gonorynchiform fishes inferred using nuclear gene DNA sequences (Teleostei: Ostariophysi). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.hb653
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