Data from: Dynamics of molecular evolution in RNA virus populations depend on sudden versus gradual environmental change

Morley VJ, Turner PE

Date Published: July 24, 2017

DOI: http://dx.doi.org/10.5061/dryad.hd45h

 

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Title allele frequencies in virus populations over time
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Description This data set describes the frequencies of mutant alleles relative to the ancestral genome in Sindbis virus populations over the course of an evolution experiment. Virus populations were sampled at 8 time points, labeled in the table by experimental passage number. All virus samples were prepared and sequenced in duplicate. The table reports frequencies for mutant alleles that were detected in both technical replicates at a frequency >0.01. For these frequencies, the mean of the two technical replicates is reported. Alleles are named by the position of the nucleotide in the genome and the base detected. Raw sequencing data used to generate this table is in the process of being deposited in SRA.
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When using this data, please cite the original publication:

Morley VJ, Turner PE (2017) Dynamics of molecular evolution in RNA virus populations depend on sudden versus gradual environmental change. Evolution 71(4): 872-883. http://dx.doi.org/10.1111/evo.13193

Additionally, please cite the Dryad data package:

Morley VJ, Turner PE (2017) Data from: Dynamics of molecular evolution in RNA virus populations depend on sudden versus gradual environmental change. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.hd45h
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