Data from: The role of transcriptome resilience in resistance of corals to bleaching

Seneca FO, Palumbi SR

Date Published: February 24, 2015

DOI: http://dx.doi.org/10.5061/dryad.hd922

 

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Title Raw_counts_data
Downloaded 59 times
Description Read counts for all 152 samples and 33,496 contigs.
Download Supp_mat_Spreadsheet1_Raw_counts_data.xlsx (30.82 Mb)
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Title Full experimental design
Downloaded 7 times
Description Experimental design for DESeq analysis.
Download fullRTEdesign.csv (4.769 Kb)
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Title DESeq Analysis 5h
Downloaded 21 times
Description R commands for DESeq analysis on 5 hr data.
Download DESeqAnalysis5h_nov2013.R (29.69 Kb)
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Title DESeq Analysis 20h
Downloaded 16 times
Description R commands for DESeq analysis on 20 hr data.
Download DESeqAnalysis20h_nov2013.R (28.12 Kb)
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Title 33,496 Acropora hyacinthus contigs
Downloaded 10 times
Description Fasta file of the 33,496 assembled contiguous sequences from Acropora hyacinthus type E from Ofu Island, American Samoa.
Download 33496_Ahyacinthus_CoralContigs.fasta (17.59 Mb)
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Title 33496 Acropora hyacinthus Contigs Annotation
Downloaded 41 times
Description Annotations for the 33,496 contigs from Acropora hyacinthus.
Download 33496_Ahyacinthus_Contigs_Annotation.xlsx (7.201 Mb)
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Title Read counts for 5 hr samples
Downloaded 7 times
Description Input file for DESeq analysis on 5 hr samples.
Download CombinedCounts_5h.txt (6.689 Mb)
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Title Read counts for 20 hr samples
Downloaded 4 times
Description Input file for DESeq analysis on 20 hr samples.
Download CombinedCounts_20h.txt (6.709 Mb)
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When using this data, please cite the original publication:

Seneca FO, Palumbi SR (2015) The role of transcriptome resilience in resistance of corals to bleaching. Molecular Ecology 24(7): 1467-1484. http://dx.doi.org/10.1111/mec.13125

Additionally, please cite the Dryad data package:

Seneca FO, Palumbi SR (2015) Data from: The role of transcriptome resilience in resistance of corals to bleaching. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.hd922
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