Data from: Home bodies and wanderers: sympatric lineages of the deep-sea black coral Leiopathes glaberrima

Ruiz-Ramos DV, Saunders MG, Fisher CR, Baums IB

Date Published: October 26, 2015

DOI: http://dx.doi.org/10.5061/dryad.hf03h

 

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Title Ruiz-Ramos_et_al_2014_Leiopathes_Genotypes
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Download Ruiz-Ramos_et_al_2014_Leiopathes_Genotypes.txt (21.45 Kb)
Download Readme file genotypes 2015.txt (1.002 Kb)
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Title Ruiz-Ramos_et_al_2014_DS_STRUCTURE
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Description Input file for Structure v 2.3.3. First line contains locus names. One line per individual. Missing data is encoded as -9. Column1: Sample ID; Column2: Population; Column3: Population Flag; Column 4-23: allele sizes
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Title Ruiz-Ramos_et_al_2014_Structure_Parameters
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Description Parameters for Structure v 2.3.3.
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Title VK906_MaxEnt_dryad
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Description Environmental data is in ASCII grid file format for VK906. This is a non-proprietary text file format for gridded data. This file format describes the number of columns and the number of rows, the origin in the lower left corner, the cell-size, and a value or no-data value for each cell starting in the upper-left corner. ASC grids were used for Bathymetry, Slope, and Aspect. Bathymetry is the depth below sea-level. Slope is the value in degree or slope percentage between adjacent cells. Aspect is the direction of slope between adjacent cells. Slope and Aspect were derived from Bathymetry collected with a multibeam echo-sounder. CSV files contain the UTM location for each coral collected and an attribute that was analyzed in MaxEnt. (Clone ID, Color, and MSAT Lineage)
Download VK906_MaxEnt_dryad.zip (1.478 Mb)
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Title VK826_MaxEnt_dryad
Downloaded 8 times
Description Environmental data is in ASCII grid file format for VK826. This is a non-proprietary text file format for gridded data. This file format describes the number of columns and the number of rows, the origin in the lower left corner, the cell-size, and a value or no-data value for each cell starting in the upper-left corner. ASC grids were used for Bathymetry, Slope, and Aspect. Bathymetry is the depth below sea-level. Slope is the value in degree or slope percentage between adjacent cells. Aspect is the direction of slope between adjacent cells. Slope and Aspect were derived from Bathymetry collected with a multibeam echo-sounder. CSV files contain the UTM location for each coral collected and an attribute that was analyzed in MaxEnt. (Clone ID, Color, and MSAT Lineage)
Download VK826_MaxEnt_dryad.zip (19.22 Mb)
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When using this data, please cite the original publication:

Ruiz-Ramos DV, Saunders MG, Fisher CR, Baums IB (2015) Home bodies and wanderers: sympatric lineages of the deep-sea black coral Leiopathes glaberrima. PLOS ONE 10(10): e0138989. http://dx.doi.org/10.1371/journal.pone.0138989

Additionally, please cite the Dryad data package:

Ruiz-Ramos DV, Saunders MG, Fisher CR, Baums IB (2015) Data from: Home bodies and wanderers: sympatric lineages of the deep-sea black coral Leiopathes glaberrima. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.hf03h
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