Data from: Air-borne genotype by genotype indirect genetic effects are substantial in the filamentous fungus Aspergillus nidulans

Rode NO, Soroye P, Kassen R, Rundle HD

Date Published: January 30, 2017

DOI: http://dx.doi.org/10.5061/dryad.hg600

 

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Title Dataset used for the analyses
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Description Mycelium growth rate data used of the linear mixed model analyses
Download DataRode_et_al2017.csv (42.08 Kb)
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Title Script for mixed model analyses
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Description Script for the analyses with ASReml-R (see http://www.vsni.co.uk/downloads/asreml/version-3-upgrade/)
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Title Script and figures from mixed model analyses
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Description Output when knitting the file "Mixed_Model_Analyses.Rmd" using Rstudio (https://www.rstudio.com/) PowerAnalyses.Rmd: Code for the power analyses
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Title Script for power analyses
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Description Code for power analyses
Download PowerAnalyses.Rmd (25.48 Kb)
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Title Script and figures from power analyses
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Description Output when knitting the file "PowerAnalyses.Rmd" using Rstudio (https://www.rstudio.com/)
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Title R environment for Fig. S4
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Description R environment including the 1000 simulations for Fig. S4 (can be loaded using the command: "load(SimulFigS4new.R)")
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Title R environment for Fig. S5
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Description R environment including the 1000 simulations for Fig. S5 (can be loaded using the command: "load(SimulFigS5new.R)")
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Title Estimates of the direct genetic effects
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Description Estimates of the direct genetic effects of the 41 strains
Download DGEGenotypicValues20170113.csv (2.196 Kb)
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Title Estimates of the G x G indirect genetics effects
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Description Estimates of the 417 GxG indirect genetic effects in the best model for dataset3 analyses (used for Fig. S6)
Download GbyGGenotypicValues20170113.csv (74.36 Kb)
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When using this data, please cite the original publication:

Rode NO, Soroye P, Kassen R, Rundle HD (2017) Air-borne genotype by genotype indirect genetic effects are substantial in the filamentous fungus Aspergillus nidulans. Heredity 119(1): 1-7. http://dx.doi.org/10.1038/hdy.2017.9

Additionally, please cite the Dryad data package:

Rode NO, Soroye P, Kassen R, Rundle HD (2017) Data from: Air-borne genotype by genotype indirect genetic effects are substantial in the filamentous fungus Aspergillus nidulans. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.hg600
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